RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-209ENST00000539197 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 RIIAD1A6NNX1 92 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 HYPMO75409 117 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 CRHP06850 196 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 DYNLT3P51808 116 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 UBE2BP63146 152 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 POU6F1Q14863 301 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 TEX261Q6UWH6 196 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 OR10K1Q8NGX5 313 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 OR13C6PQ8NH95 151 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 NEK7Q8TDX7 302 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 CANT1Q8WVQ1 401 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 YPEL2Q96QA6 119 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 LYSMD1Q96S90 227 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 PRRT1Q99946 306 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 SLC25A21Q9BQT8 299 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-209ENST00000539197 NPCDR1Q9BY65 106 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 SH3BGRL3Q9H299 93 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 C14orf132Q9NPU4 83 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 LYRM2Q9NU23 88 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-209ENST00000539197 KLK9Q9UKQ9 250 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 U3KQ87 197 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 DLG5Q8TDM6 1919 aa0.71□□□□□ -2.3
CCDC7-209ENST00000539197 EIF3AQ14152 1382 aaKnown RBP0.7□□□□□ -2.3
CCDC7-209ENST00000539197 SCN10AQ9Y5Y9 1956 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 BRWD1Q9NSI6 2320 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 CCDC88AQ3V6T2 1871 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 A8MWV9 139 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 AIPO00170 330 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 GEMIN2O14893 280 aaKnown RBP0.7□□□□□ -2.3
CCDC7-209ENST00000539197 DHFRP00374 187 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 CXCL1P09341 107 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 NEFHP12036 1026 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 S100A5P33763 92 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 GLRXP35754 106 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 CRYBA4P53673 196 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 TMBIM6P55061 237 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 ROMO1P60602 79 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 EIF5AL1Q6IS14 154 aaKnown RBP0.7□□□□□ -2.3
CCDC7-209ENST00000539197 TEX47Q8TBZ9 253 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 ZHX1-C8orf76Q96EF9 292 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 TEX37Q96LM6 180 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 OBSCN-AS1Q96MR7 158 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 PBDC1Q9BVG4 233 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 OR2J1Q9GZK6 312 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 IL20Q9NYY1 176 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 ZFP30Q9Y2G7 519 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 RIMBP3CA6NJZ7 1639 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 RIMBP3BA6NNM3 1639 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 RIMBP3Q9UFD9 1639 aa0.7□□□□□ -2.3
CCDC7-209ENST00000539197 LOC110117498A0A087WWA1 95 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 A0A087WX48 190 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 TRBV6-7A0A0A0MS04 114 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 TCRBV4S1A1TA0A5B7 111 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 ODAMA1E959 279 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 ZNF736B4DX44 427 aaPredicted RBP0.69□□□□□ -2.3
CCDC7-209ENST00000539197 E5RI56 91 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 GGCTO75223 188 aaKnown RBP0.69□□□□□ -2.3
CCDC7-209ENST00000539197 TRGC2P03986 189 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 CSN2P05814 226 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 HLA-EP13747 358 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 ARPP19P56211 112 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 MSMO1Q15800 293 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 LTC4SQ16873 150 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 DEFB115Q30KQ5 88 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 SCGB2B2Q4G0G5 96 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 C3orf33Q6P1S2 294 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 PATE2Q6UY27 113 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 FAM19A2Q8N3H0 131 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 Q8N814 137 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 TMEM254Q8TBM7 123 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 ZC2HC1AQ96GY0 325 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 ODF3Q96PU9 254 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 GPX7Q96SL4 187 aaPredicted RBP0.69□□□□□ -2.3
CCDC7-209ENST00000539197 GPER1Q99527 375 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 POPDC3Q9HBV1 291 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 CDC42SE1Q9NRR8 79 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 CHCHD2Q9Y6H1 151 aaPredicted RBP0.69□□□□□ -2.3
CCDC7-209ENST00000539197 STRCQ7RTU9 1775 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 ZNF106Q9H2Y7 1883 aaKnown RBP0.69□□□□□ -2.3
CCDC7-209ENST00000539197 TECTAO75443 2155 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 RP1P56715 2156 aa0.69□□□□□ -2.3
CCDC7-209ENST00000539197 CAMSAP1Q5T5Y3 1602 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 MYOFQ9NZM1 2061 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 K7ERJ3 54 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 CD2P06729 351 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 ZNF25P17030 456 aaPredicted RBP0.68□□□□□ -2.3
CCDC7-209ENST00000539197 OGNP20774 298 aaKnown RBP0.68□□□□□ -2.3
CCDC7-209ENST00000539197 MYL5Q02045 173 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 C1orf134Q5TEV5 83 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 ARFGEF3Q5TH69 2177 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 TRIQKQ629K1 86 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 GRINAQ7Z429 371 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 STX19Q8N4C7 294 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 OR4K15Q8NH41 348 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 PPTC7Q8NI37 304 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 CARD19Q96LW7 228 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 ZNF714Q96N38 554 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 LINC00467Q9BRT7 94 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms