RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RCVRNP35243 200 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PSMD8P48556 350 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF80P51504 273 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 GTF2A1P52655 376 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 AP2S1P53680 142 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TAS2R45P59539 299 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RHOGP84095 191 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF117Q03924 483 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ANGPT1Q15389 498 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TAF9Q16594 264 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PDZD11Q5EBL8 140 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 C1orf195Q5TG92 126 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CST9Q5W186 159 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 GLT8D1Q68CQ7 371 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PATE2Q6UY27 113 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM136Q6ZRR5 245 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DEFB132Q7Z7B7 95 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 GPHB5Q86YW7 130 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RPP25LQ8N5L8 163 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR8B12Q8NGG6 310 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SCGB1C1Q8TD33 95 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 BLNKQ8WV28 456 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IFT81Q8WYA0 676 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RBPMSQ93062 196 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IGF2BP2-AS1Q96M15 143 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CCDC42Q96M95 316 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PPP1R2P1Q96PQ5 205 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DCUN1D5Q9BTE7 237 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ING2Q9H160 280 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR2D2Q9H210 308 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SLC23A2Q9UGH3 650 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 MCTS1Q9ULC4 181 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TCHHQ07283 1943 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 MLH3Q9UHC1 1453 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CSMD1Q96PZ7 3565 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SMG1Q96Q15 3661 aaKnown RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 MIA2Q96PC5 1412 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TRBV19A0A075B6N1 114 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TMED7-TICAM2A0A0A6YYA0 188 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 LOC107984640A0A0U1RRK4 108 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SPAARA0A1B0GVQ0 90 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 hADV38S2A0JD32 116 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 C7orf71A4D174 169 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 ATP6V1G2-DDX39BF2Z307 99 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 CCL25O15444 150 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 CLPSP04118 112 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF728P0DKX0 622 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 HSPA9P38646 679 aaKnown RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 MAP2K4P45985 399 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 FXYD2P54710 66 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 MP68P56378 58 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 PPP1R1AQ13522 171 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 MAPK14Q16539 360 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 KRTAP25-1Q3LHN0 102 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 GLYATL3Q5SZD4 288 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 LCE3AQ5TA76 89 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 FAM78BQ5VT40 261 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 OR10K2Q6IF99 312 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 FP248Q71RG6 208 aaPredicted RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SPATA12Q7Z6I5 190 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TMED4Q7Z7H5 227 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SGPP2Q8IWX5 399 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 CT55Q8WUE5 264 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 KCTD4Q8WVF5 259 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 KLK6Q92876 244 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 C12orf43Q96C57 262 aaKnown RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 ADAT3Q96EY9 351 aaPredicted RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TEX37Q96LM6 180 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 ULBP1Q9BZM6 244 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 CHST6Q9GZX3 395 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF286AQ9HBT8 521 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 PRTFDC1Q9NRG1 225 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 U3KQK5 164 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SACSQ9NZJ4 4579 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 FAT2Q9NYQ8 4349 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 MUC19Q7Z5P9 8384 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SHROOM3Q8TF72 1996 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 VWFP04275 2813 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 MYCBP2O75592 4640 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 NLRP1Q9C000 1473 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TRBV7-6A0A0J9YX20 115 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 LOC102725191A0A1B0GVB3 256 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 LOC107986453A0A1B0GWG9 222 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TP53I11O14683 189 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 OVOL1O14753 267 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 NRASP01111 189 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SOD3P08294 240 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 RPS12P25398 132 aaKnown RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 FKBP2P26885 142 aaKnown RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 AKR1C3P42330 323 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SRP9P49458 86 aaKnown RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 INSL3P51460 131 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM267Q0VDI3 215 aaPredicted RBP0.51□□□□□ -2.33
HIF1A-204ENST00000539097 RSU1Q15404 277 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 TNFAIP8L3Q5GJ75 292 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 NOXRED1Q6NXP6 359 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 SLC25A34Q6PIV7 304 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 ANGPTL5Q86XS5 388 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 OR11G2Q8NGC1 345 aa0.51□□□□□ -2.33
HIF1A-204ENST00000539097 GNPDA2Q8TDQ7 276 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms