RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TMEM133Q9H2Q1 129 aa11.65□□□□□ -0.54
CDCA3-207ENST00000538862 DYNLRB1Q9NP97 96 aa11.65□□□□□ -0.54
CDCA3-207ENST00000538862 ZNF331Q9NQX6 463 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-207ENST00000538862 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
CDCA3-207ENST00000538862 OTOGQ6ZRI0 2925 aa11.65□□□□□ -0.55
CDCA3-207ENST00000538862 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 SHISA9B4DS77 424 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 GRAMD2BQ96HH9 432 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 RITA1Q96K30 269 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 LINC00479Q96M42 142 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 TRGV9Q99603 122 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 TNFRSF19Q9NS68 423 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 E7EQL1 145 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 M0R143 59 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 BMPR1BO00238 502 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 REG1AP05451 166 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 CD33P20138 364 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 SLC35B1P78383 322 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 PAX2Q02962 417 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 TMEM183BQ1AE95 376 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 KCNS1Q96KK3 526 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 TPSG1Q9NRR2 321 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
CDCA3-207ENST00000538862 ROS1P08922 2347 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 A6NNC1 897 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 EREGO14944 169 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 ENSAO43768 121 aaKnown RBP11.63□□□□□ -0.55
CDCA3-207ENST00000538862 ZNF253O75346 499 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 APCSP02743 223 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 CRYGBP07316 175 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 MRPL54Q6P161 138 aaKnown RBP11.63□□□□□ -0.55
CDCA3-207ENST00000538862 NHLRC2Q8NBF2 726 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 SNHG12Q9BXW3 62 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
CDCA3-207ENST00000538862 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
CDCA3-207ENST00000538862 ARFGEF3Q5TH69 2177 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 IGHV1-69-2A0A0G2JMI3 117 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 C22orf46C9J442 243 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 CORTO00230 105 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 APOBEC3AP31941 199 aaPredicted RBP11.62□□□□□ -0.55
CDCA3-207ENST00000538862 RPL27AP46776 148 aaKnown RBP11.62□□□□□ -0.55
CDCA3-207ENST00000538862 PRRX1P54821 245 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 KIAA1644Q3SXP7 199 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 NUDT10Q8NFP7 164 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 FAM168AQ92567 244 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 NUDT11Q96G61 164 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 EPDR1Q9UM22 224 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 CELSR1Q9NYQ6 3014 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 A0A1W2PS18 150 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 SRIP30626 198 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 CDKN1AP38936 164 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 VN1R17PQ8TDU5 208 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 MIEN1Q9BRT3 115 aa11.62□□□□□ -0.55
CDCA3-207ENST00000538862 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 B9A039 149 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
CDCA3-207ENST00000538862 COMPP49747 757 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-207ENST00000538862 PLP1P60201 277 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 UBE2G1P62253 170 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 OR1B1Q8NGR6 318 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 VAMP8Q9BV40 100 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 MRPL27Q9P0M9 148 aaKnown RBP11.61□□□□□ -0.55
CDCA3-207ENST00000538862 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
CDCA3-207ENST00000538862 TBL2Q9Y4P3 447 aaKnown RBP11.61□□□□□ -0.55
CDCA3-207ENST00000538862 CA1P00915 261 aaPredicted RBP11.6□□□□□ -0.55
CDCA3-207ENST00000538862 IGLV1-47P01700 117 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 ORM2P19652 201 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 AMTP48728 403 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 MFAP2P55001 183 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 TNXAQ16473 311 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 SSBP3Q9BWW4 388 aaPredicted RBP11.6□□□□□ -0.55
CDCA3-207ENST00000538862 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 SIGLEC9Q9Y336 463 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 IGHV2-26A0A0B4J1V2 119 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 IGHV3-72A0A0B4J1Y9 119 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 SIAH2O43255 324 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 HYPMO75409 117 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
CDCA3-207ENST00000538862 MOSP00540 346 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
CDCA3-207ENST00000538862 NBEAP1P0C6P0 100 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 TDRG1Q3Y452 100 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 RCHY1Q96PM5 261 aa11.6□□□□□ -0.55
CDCA3-207ENST00000538862 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
CDCA3-207ENST00000538862 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 PGPA6NDG6 321 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 PLAUP00749 431 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 NPSP0C0P6 89 aa11.59□□□□□ -0.55
CDCA3-207ENST00000538862 SLAQ13239 276 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms