RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 FUT9Q9Y231 359 aa13.25□□□□□ -0.29
CLN6-202ENST00000538696 TRAV30A0A087WSZ9 112 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 OR2T8A6NH00 312 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 TOMM40O96008 361 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 STAG3L2P0CL84 134 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 STAG3L3P0CL85 134 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 S100A1P23297 94 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 LYZP61626 148 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 CLEC19AQ6UXS0 136 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 OR1L4Q8NGR5 311 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 RAX2Q96IS3 184 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 DUX3Q96PT4 197 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
CLN6-202ENST00000538696 IGHV4OR15-8A0A075B7B6 117 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 A0A087WW49 117 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 FABP1P07148 127 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 RD3LP0DJH9 198 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 ORM2P19652 201 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 GPR183P32249 361 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 PLP1P60201 277 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 HAGHQ16775 308 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 MORN5Q5VZ52 161 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 OR1B1Q8NGR6 318 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 GATAD1Q8WUU5 269 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 ZNF414Q96IQ9 312 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 PFDN5Q99471 154 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 CHRDL1Q9BU40 450 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 GNG13Q9P2W3 67 aa13.23□□□□□ -0.29
CLN6-202ENST00000538696 PEF1Q9UBV8 284 aaKnown RBP13.23□□□□□ -0.29
CLN6-202ENST00000538696 LOC102723971A0A1B0GUV8 181 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 C9JQL5 133 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 PPP5D1E7EU14 171 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 BMPR1BO00238 502 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 CD5P06127 495 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 ADMP35318 185 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 YPEL3P61236 119 aaPredicted RBP13.22□□□□□ -0.29
CLN6-202ENST00000538696 FHL3Q13643 280 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 FAM209BQ5JX69 171 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 C10orf113Q5VZT2 155 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 IQCF2Q8IXL9 164 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 OR11H1Q8NG94 326 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 OR1N2Q8NGR9 330 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 LINC00052Q96N35 136 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 RNF2Q99496 336 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 RARRES2Q99969 163 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 MRPL32Q9BYC8 188 aaKnown RBP13.22□□□□□ -0.29
CLN6-202ENST00000538696 ANK2Q01484 3957 aa13.22□□□□□ -0.29
CLN6-202ENST00000538696 TRAV5A0A0B4J249 113 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 RBFOX3A6NFN3 312 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 TGOLN2O43493 480 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 HYPMO75409 117 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
CLN6-202ENST00000538696 CLEC3BP05452 202 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 CTSGP08311 255 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 ARL3P36405 182 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 ICAM4Q14773 271 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 OR51G1Q8NGK1 321 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 UHRF2Q96PU4 802 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 PBDC1Q9BVG4 233 aa13.21□□□□□ -0.29
CLN6-202ENST00000538696 EIF5A2Q9GZV4 153 aaKnown RBP13.21□□□□□ -0.29
CLN6-202ENST00000538696 TECRQ9NZ01 308 aaKnown RBP13.21□□□□□ -0.29
CLN6-202ENST00000538696 WNK1Q9H4A3 2382 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 LINC01619G3V211 115 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 CCL24O00175 119 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 CXorf1O96002 111 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 BCL2P10415 239 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 GCHFRP30047 84 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 PEA15Q15121 130 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 SPATA3Q8NHX4 192 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 ZNF503Q96F45 646 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 NARS2Q96I59 477 aaKnown RBP13.2□□□□□ -0.3
CLN6-202ENST00000538696 FAM167A-AS1Q96KT0 104 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 SLC25A2Q9BXI2 301 aa13.2□□□□□ -0.3
CLN6-202ENST00000538696 WI2-2373I1.2A0A1W2PRP0 233 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
CLN6-202ENST00000538696 SCGB2A1O75556 95 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 C8orf88P0DMB2 117 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 ZP3P21754 424 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 MYCNOSP40205 109 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 SLURP1P55000 103 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 RXFP4Q8TDU9 374 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 OR4F4Q96R69 305 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 GAR1Q9NY12 217 aaKnown RBP13.19□□□□□ -0.3
CLN6-202ENST00000538696 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
CLN6-202ENST00000538696 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
CLN6-202ENST00000538696 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 M0QZ24 198 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
CLN6-202ENST00000538696 IFNA1P01562 189 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 IL4P05112 153 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 HOXD3P31249 432 aaPredicted RBP13.18□□□□□ -0.3
CLN6-202ENST00000538696 TAS2R45P59539 299 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms