RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 E7EUB6 86 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 IGLV1-44P01699 117 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 SUB1P53999 127 aaKnown RBP eCLIP14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 WT1-ASQ06250 92 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 DHRS13Q6UX07 377 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 ZCCHC24Q8N2G6 241 aaKnown RBP14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 LINC00574Q9H8X3 128 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 A0A1W2PNU3 283 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 IGHV3-48P01763 117 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 ORM2P19652 201 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 HSD52Q0P140 79 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 KIR3DS1Q14943 382 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 TMEM30BQ3MIR4 351 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 BOD1L2Q8IYS8 172 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 OR5AN1Q8NGI8 311 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 RND1Q92730 232 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 HEATR1Q9H583 2144 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 NAV3Q8IVL0 2385 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 CLEC2AQ6UVW9 174 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 FA2HQ7L5A8 372 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 CNEP1R1Q8N9A8 125 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 OR5A1Q8NGJ0 315 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 MRPL36Q9P0J6 103 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 RPUSD1Q9UJJ7 312 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 CACNA1GO43497 2377 aa14.92□□□□□ -0.02
SFSWAP-207ENST00000538548 CD59P13987 128 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 SPRNQ5BIV9 151 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 OR9G4Q8NGQ1 327 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 FAM222BQ8WU58 562 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 JKAMPQ9P055 326 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 A0A1B0GUT8 65 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 Q86TA4 180 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 WFDC8Q8IUA0 241 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 Q9H3A6 140 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
SFSWAP-207ENST00000538548 IGHV1-18A0A0C4DH31 117 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 OVOL3O00110 214 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 CEACAM3P40198 252 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 DUX4L9Q6RFH8 374 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 C16orf54Q6UWD8 224 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 ZNF833PQ6ZTB9 187 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 LHFPL4Q7Z7J7 247 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 VSTM2AQ8TAG5 236 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 ZNRD1Q9P1U0 126 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 C9orf172C9J069 976 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 SMIM17P0DL12 118 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 GP9P14770 177 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 FAM201AQ5SY85 155 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 GATD1Q8NB37 220 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 PRSS3P2Q8NHM4 247 aa14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 COL27A1Q8IZC6 1860 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-207ENST00000538548 A1L4Q6 167 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 SIVA1O15304 175 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 APOBEC3AP31941 199 aaPredicted RBP14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 RBPJQ06330 500 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 MRPL20Q9BYC9 149 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 CGB1A6NKQ9 187 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 SMAD7O15105 426 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 RIGQ13278 110 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 MSMPQ1L6U9 139 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 RPRMLQ8N4K4 120 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 TMEM167AQ8TBQ9 72 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 HILPDAQ9Y5L2 63 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 SELENOKQ9Y6D0 94 aa14.89□□□□□ -0.03
SFSWAP-207ENST00000538548 ACP1P24666 158 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 HES3Q5TGS1 186 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 CIARTQ8N365 385 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 OR4X2Q8NGF9 303 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 OR4A5Q8NH83 315 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 NAA38Q9BRA0 125 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 NPFFR1Q9GZQ6 430 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 A0A1W2PPM0 123 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 C22orf46C9J442 243 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 TM4SF5O14894 197 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 NHLH1Q02575 133 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 LGALS9BQ3B8N2 356 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 LGALS9CQ6DKI2 356 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 ADAMTSL5Q6ZMM2 481 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 BHLHA15Q7RTS1 189 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 TMEM186Q96B77 213 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 SPCS1Q9Y6A9 102 aa14.88□□□□□ -0.03
SFSWAP-207ENST00000538548 ATMQ13315 3056 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 A0A1B0GW15 77 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 OR8A1Q8NGG7 326 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 FLYWCH2Q96CP2 140 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 CEP295Q9C0D2 2601 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 ARMS2P0C7Q2 107 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 KIR2DL2P43627 348 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 PLA2G2CQ5R387 149 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 C10orf55Q5SWW7 151 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 THYN1Q9P016 225 aa14.87□□□□□ -0.03
SFSWAP-207ENST00000538548 A0A096LNJ9 63 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 TRAV8-1A0A0A6YYK1 113 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 TRGV9Q99603 122 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 COL25A1Q9BXS0 654 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 H3BTX0 84 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 KLK10O43240 276 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 LGALS7P47929 136 aa14.86□□□□□ -0.03
SFSWAP-207ENST00000538548 GAFA1Q96PS6 74 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms