RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LCN15Q6UWW0 184 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 C12orf54Q6X4T0 127 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 OR11H1Q8NG94 326 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 C4orf3Q8WVX3 66 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 WFDC12Q8WWY7 111 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TMEM158Q8WZ71 300 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 SAT2Q96F10 170 aaPredicted RBP8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 GRAMD2BQ96HH9 432 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 HRH4Q9H3N8 390 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 VSIRQ9H7M9 311 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 SLC25A22Q9H936 323 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RPRMQ9NS64 109 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 UFC1Q9Y3C8 167 aa8.24□□□□□ -1.09
TNFRSF1A-211ENST00000538363 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CTXND1A0A1B0GTU2 59 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 MAP1LC3B2A6NCE7 125 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 HMGB3O15347 200 aaKnown RBP8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 ZNF207O43670 478 aaKnown RBP8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 OR7C2O60412 319 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TRBV12-3P01733 135 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 ADMP35318 185 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IFITM2Q01629 132 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TOMM20LQ6UXN7 152 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 LINC00305Q7Z4B0 112 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 C3orf56Q8N813 242 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PCNPQ8WW12 178 aaKnown RBP8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 MRPL32Q9BYC8 188 aaKnown RBP8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 MAP1LC3BQ9GZQ8 125 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 FUT9Q9Y231 359 aa8.23□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGHV4OR15-8A0A075B7B6 117 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 A0A087WW49 117 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 A0A1W2PS18 150 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CXorf1O96002 111 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IFNA1P01562 189 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PF4P02776 101 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 C8orf88P0DMB2 117 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RPL11P62913 178 aaKnown RBP8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 DEFB136Q30KP8 78 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 KHDC3LQ587J8 217 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 AWAT1Q58HT5 328 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 GCSAMLQ5JQS6 135 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 NDUFA11Q86Y39 141 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 OR8I2Q8N0Y5 310 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 RAB24Q969Q5 203 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 TMEM231Q9H6L2 316 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 PEMTQ9UBM1 199 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 CUBNO60494 3623 aa8.22□□□□□ -1.09
TNFRSF1A-211ENST00000538363 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ZNF785A8K8V0 405 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 F8W735 103 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 CCL24O00175 119 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 HOXD3P31249 432 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 FHITP49789 147 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 FGF8P55075 233 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SYNJ2BPP57105 145 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PLP1P60201 277 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 KIAA0141Q14154 515 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TCTEX1D4Q5JR98 221 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 C18orf65Q6ZTR6 163 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MIR17HGQ75NE6 70 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 GPHB5Q86YW7 130 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 C1QL4Q86Z23 238 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 STXBP6Q8NFX7 210 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MYOZ3Q8TDC0 251 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 DUX3Q96PT4 197 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ELOVL1Q9BW60 279 aa8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF1A-211ENST00000538363 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 I3L521 148 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RGS13O14921 159 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SLURP1P55000 103 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 IL34Q6ZMJ4 242 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PRIMA1Q86XR5 153 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RPP25LQ8N5L8 163 aaKnown RBP8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 OR4F17Q8NGA8 305 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TMEM37Q8WXS4 190 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 OR4F4Q96R69 305 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PAXXQ9BUH6 204 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 OR51M1Q9H341 326 aa8.2□□□□□ -1.1
TNFRSF1A-211ENST00000538363 TRAV5A0A0B4J249 113 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 ZNF98A6NK75 572 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 SEC14L6B5MCN3 397 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 RPL7P18124 248 aaKnown RBP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 MYCNOSP40205 109 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 GALR1P47211 349 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 PPT1P50897 306 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 USF2Q15853 346 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
TNFRSF1A-211ENST00000538363 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms