RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 KLRD1Q13241 179 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 MMD2Q8IY49 270 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 OR2T6Q8NHC8 308 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 RPEQ96AT9 228 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 NUDT11Q96G61 164 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 SAMD10Q9BYL1 202 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 SIGLEC9Q9Y336 463 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 AMMECR1Q9Y4X0 333 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-210ENST00000538120 IGLC7A0M8Q6 106 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 ODF3BA8MYP8 253 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 PRTN3P24158 256 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 EFNA4P52798 201 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 RAB31Q13636 194 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 IGFBPL1Q8WX77 278 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 CACNG8Q8WXS5 425 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 VAMP8Q9BV40 100 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 RNASE7Q9H1E1 156 aaKnown RBP8.57□□□□□ -1.04
CLIP1-210ENST00000538120 FNDC4Q9H6D8 234 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-210ENST00000538120 GNB4Q9HAV0 340 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 LPAR2Q9HBW0 351 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 V9GYV3 84 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 ESDP10768 282 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 SSBP2P81877 361 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-210ENST00000538120 FXYD3Q14802 87 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 PVRIGQ6DKI7 326 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 MIR17HGQ75NE6 70 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 RCHY1Q96PM5 261 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 CFAP46Q8IYW2 2715 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 REG1AP05451 166 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 GATA2P23769 480 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-210ENST00000538120 MFAP2P55001 183 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 TCL1AP56279 114 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 KRTDAPP60985 99 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 TMEM183BQ1AE95 376 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 Q8N976 141 aa8.56□□□□□ -1.04
CLIP1-210ENST00000538120 SPTBN1Q01082 2364 aaKnown RBP8.56□□□□□ -1.04
CLIP1-210ENST00000538120 OVOL3O00110 214 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 TIMM23O14925 209 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 CRYBB3P26998 211 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 HTR1DP28221 377 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
CLIP1-210ENST00000538120 PAX2Q02962 417 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 TNXAQ16473 311 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 RPEL1Q2QD12 228 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 RUSC1-AS1Q66K80 236 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 PQLC2Q6ZP29 291 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 C19orf35Q6ZS72 473 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 TXNDC17Q9BRA2 123 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 SRSF8Q9BRL6 282 aaKnown RBP8.55□□□□□ -1.04
CLIP1-210ENST00000538120 MRPL36Q9P0J6 103 aaKnown RBP8.55□□□□□ -1.04
CLIP1-210ENST00000538120 DPM3Q9P2X0 92 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 ARHGAP32A7KAX9 2087 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 K7EQM0 130 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 GPX1P07203 203 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 AREGP15514 252 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 RPL27AP46776 148 aaKnown RBP8.55□□□□□ -1.04
CLIP1-210ENST00000538120 FBLN7Q53RD9 439 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 CENPWQ5EE01 88 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 RNF5Q99942 180 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 FBXL15Q9H469 300 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 NAT8BQ9UHF3 227 aa8.55□□□□□ -1.04
CLIP1-210ENST00000538120 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
CLIP1-210ENST00000538120 IGKV1D-37A0A075B6S9 117 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 TEX22C9J3V5 150 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 RHOBP62745 196 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 Q0VG73 95 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 PPP1R27Q86WC6 154 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 SIGLECL1Q8N7X8 197 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 SLC35E1Q96K37 410 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 UHRF2Q96PU4 802 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 PEF1Q9UBV8 284 aaKnown RBP8.54□□□□□ -1.04
CLIP1-210ENST00000538120 HILPDAQ9Y5L2 63 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 TACC2O95359 2948 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 A0A1W2PRD5 423 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 A0A1W2PRF3 423 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 A0A1W2PRM7 423 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 C9JCJ5 164 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 IGHV3-48P01763 117 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 PMCHP20382 165 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 SUB1P53999 127 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLIP1-210ENST00000538120 MMDQ15546 238 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 RBPMS2Q6ZRY4 209 aaKnown RBP8.54□□□□□ -1.04
CLIP1-210ENST00000538120 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
CLIP1-210ENST00000538120 PSMB11A5LHX3 300 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 CA1P00915 261 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-210ENST00000538120 OR10J4P0C629 311 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 GNG4P50150 75 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 LMO4P61968 165 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 MRPL54Q6P161 138 aaKnown RBP8.53□□□□□ -1.04
CLIP1-210ENST00000538120 DYNAPQ8N1N2 210 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 NPIPB3Q92617 1050 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
CLIP1-210ENST00000538120 ASCL2Q99929 193 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms