RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PLEKHB2Q96CS7 222 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 MRPL20Q9BYC9 149 aaKnown RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 TRBV6-7A0A0A0MS04 114 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 TRGV8A0A0C4DH27 118 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3-66A0A0C4DH42 116 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 SPINT1O43278 529 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 WNT9BO14905 357 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 IGFBP3P17936 291 aaPredicted RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 PTGDSP41222 190 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 LINC01559Q495D7 138 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 SLC25A48Q6ZT89 311 aaKnown RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 S4R3C0 116 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3OR16-8A0A075B7F1 116 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 TRAV8-3A0A0A6YYJ7 113 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 CXorf51AA0A1B0GTR3 108 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 IL11RAQ14626 422 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 TRAV17A0A0B4J275 112 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 CD3EP07766 207 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF721Q8TF20 911 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 A0A0A6YYD4 124 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF688P0C7X2 276 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 TCF15Q12870 199 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 LOC102723996A0A087X1L8 192 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 RBMY1BA6NDE4 496 aaKnown RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 RBMY1EA6NEQ0 496 aaKnown RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 RBMY1DP0C7P1 496 aaKnown RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 RBMY1A1P0DJD3 496 aaKnown RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 RBMY1CP0DJD4 496 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 PF4V1P10720 104 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 SUPT4H1P63272 117 aaKnown RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 MAFAQ8NHW3 353 aaPredicted RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 TRAV13-1A0A0B4J241 112 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 ITLN1Q8WWA0 313 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 DCTN5Q9BTE1 182 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3OR16-12A0A075B7B8 117 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 PRR32B1ATL7 298 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 GAS1P54826 345 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 TMEM258P61165 79 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 ANXA2RQ3ZCQ2 193 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 RASL11AQ6T310 242 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV1D-8A0A087WSZ0 117 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV1OR21-1A0A087WYE8 117 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 CRPP02741 224 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 C3orf56Q8N813 242 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 CACNG8Q8WXS5 425 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF319Q9P2F9 582 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 TRAV26-1A0A087WT03 109 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 THY1P04216 161 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 FAM159AQ6UWV7 190 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 OR9G1Q8NH87 305 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 MRPL27Q9P0M9 148 aaKnown RBP4.73□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV2-70DA0A0C4DH43 119 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 D6R8Y8 96 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 F8W1H4 67 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 HGFACQ04756 655 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 C15orf53Q8NAA6 179 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 GATD1Q8NB37 220 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 HECTD1Q9ULT8 2610 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 J3KT08 172 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 IGHMP01871 453 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 EFNB3Q15768 340 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 SPATA31B1PQ5VZV4 182 aa4.73□□□□□ -1.65
CSMD1-215ENST00000537824 TOMM40O96008 361 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 CD28P10747 220 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 ATP5G2Q06055 141 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 FHL5Q5TD97 284 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 ASCL5Q7RTU5 278 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 WDR90Q96KV7 1748 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3-23P01764 117 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 CISD3P0C7P0 127 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 GLRXP35754 106 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 SIGLEC12Q96PQ1 595 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 PRADC1Q9BSG0 188 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 RS1O15537 224 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 FOXH1O75593 365 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 C1QTNF5Q9BXJ0 243 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 SIT1Q9Y3P8 196 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 ZC2HC1BQ5TFG8 222 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 LHX8Q68G74 356 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 CEP295Q9C0D2 2601 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 SPTY2D1-AS1A0A0U1RR47 76 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A27PA6NNH2 459 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 Q0VG73 95 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 CDCP2Q5VXM1 449 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 GLMPQ8WWB7 406 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 FOXA2Q9Y261 457 aaPredicted RBP4.72□□□□□ -1.65
CSMD1-215ENST00000537824 MORN3Q6PF18 240 aaPredicted RBP4.72□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF296Q8WUU4 475 aaPredicted RBP4.72□□□□□ -1.65
CSMD1-215ENST00000537824 OVOL2Q9BRP0 275 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 TMEM171Q8WVE6 324 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 C4orf51C9J302 202 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 LAMTOR3Q9UHA4 124 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 COX8AP10176 69 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 SRFP11831 508 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 HAPLN4Q86UW8 402 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 FBLN5Q9UBX5 448 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 PSG8Q9UQ74 426 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 J3QRE1 110 aa4.72□□□□□ -1.65
CSMD1-215ENST00000537824 SAP30O75446 220 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms