RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 FAM231AP0DMU4 169 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 FAM231CP0DMU5 169 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 ANXA3P12429 323 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 NUP62P37198 522 aaPredicted RBP6.03□□□□□ -1.44
USP28-203ENST00000537490 PSMB3P49720 205 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 TMBIM6P55061 237 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 ZNF79Q15937 498 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 C1orf194Q5T5A4 169 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 C1orf158Q8N1D5 194 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 COQ8AQ8NI60 647 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 RAB2BQ8WUD1 216 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 C20orf173Q96LM9 149 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 C17orf77Q96MU5 243 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 CLUHP3Q96NS8 147 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 TRGV9Q99603 122 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 PGPEP1Q9NXJ5 209 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 RFNGQ9Y644 331 aa6.03□□□□□ -1.44
USP28-203ENST00000537490 A0A0J9YX75 114 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 TMEM189A5PLL7 270 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 RTL8CO15255 209 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 PAX9P55771 341 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 RAB11AP62491 216 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 SRPXP78539 464 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 PSG9Q00887 426 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 FAM222AQ5U5X8 452 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 FAM78BQ5VT40 261 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 TMEM182Q6ZP80 229 aaPredicted RBP6.02□□□□□ -1.45
USP28-203ENST00000537490 TMED4Q7Z7H5 227 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 OR8I2Q8N0Y5 310 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 THAP8Q8NA92 274 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 PPP1R14BQ96C90 147 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 BCL7BQ9BQE9 202 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
USP28-203ENST00000537490 PAIP2BQ9ULR5 123 aaKnown RBP6.02□□□□□ -1.45
USP28-203ENST00000537490 DUXBA0A1W2PPF3 345 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 PRSS29PA6NIE9 313 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 PRSS46E5RG02 174 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 H3BMQ9 156 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 ISLRO14498 428 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 FABP1P07148 127 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 GATA2P23769 480 aaPredicted RBP6.01□□□□□ -1.45
USP28-203ENST00000537490 LGALS9BQ3B8N2 356 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 TMEM128Q5BJH2 165 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 SPATA31B1PQ5VZV4 182 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 EBLN2Q6P2I7 272 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 LRTM2Q8N967 370 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 MCFD2Q8NI22 146 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 TRIM63Q969Q1 353 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 C16orf92Q96LL3 132 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 NIPSNAP3BQ9BS92 247 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 RSG1Q9BU20 258 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 MAGT1Q9H0U3 335 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 SLC25A32Q9H2D1 315 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 GOLT1BQ9Y3E0 138 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
USP28-203ENST00000537490 IGLV2-18A0A075B6J9 118 aa6□□□□□ -1.45
USP28-203ENST00000537490 LOC102723971A0A1B0GUV8 181 aa6□□□□□ -1.45
USP28-203ENST00000537490 ZNF98A6NK75 572 aa6□□□□□ -1.45
USP28-203ENST00000537490 A8MTW9 85 aa6□□□□□ -1.45
USP28-203ENST00000537490 WRBO00258 174 aa6□□□□□ -1.45
USP28-203ENST00000537490 SYNGR2O43760 224 aa6□□□□□ -1.45
USP28-203ENST00000537490 MED6O75586 246 aa6□□□□□ -1.45
USP28-203ENST00000537490 SFT2D2O95562 160 aa6□□□□□ -1.45
USP28-203ENST00000537490 IFNA21P01568 189 aa6□□□□□ -1.45
USP28-203ENST00000537490 HBE1P02100 147 aa6□□□□□ -1.45
USP28-203ENST00000537490 PRM2P04554 102 aa6□□□□□ -1.45
USP28-203ENST00000537490 HOXB5P09067 269 aa6□□□□□ -1.45
USP28-203ENST00000537490 SLC25A6P12236 298 aa6□□□□□ -1.45
USP28-203ENST00000537490 HTN3P15516 51 aa6□□□□□ -1.45
USP28-203ENST00000537490 ORM2P19652 201 aa6□□□□□ -1.45
USP28-203ENST00000537490 VAMP1P23763 118 aa6□□□□□ -1.45
USP28-203ENST00000537490 FAUP35544 74 aaKnown RBP6□□□□□ -1.45
USP28-203ENST00000537490 PPP1R1AQ13522 171 aa6□□□□□ -1.45
USP28-203ENST00000537490 PYDC2Q56P42 97 aa6□□□□□ -1.45
USP28-203ENST00000537490 GGNBP1Q5YKI7 109 aa6□□□□□ -1.45
USP28-203ENST00000537490 IGFL4Q6B9Z1 124 aa6□□□□□ -1.45
USP28-203ENST00000537490 AMTNQ6UX39 209 aa6□□□□□ -1.45
USP28-203ENST00000537490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6□□□□□ -1.45
USP28-203ENST00000537490 TOMM5Q8N4H5 51 aa6□□□□□ -1.45
USP28-203ENST00000537490 FAM210BQ96KR6 192 aa6□□□□□ -1.45
USP28-203ENST00000537490 C7orf50Q9BRJ6 194 aaKnown RBP6□□□□□ -1.45
USP28-203ENST00000537490 SLC25A22Q9H936 323 aa6□□□□□ -1.45
USP28-203ENST00000537490 RPRMQ9NS64 109 aa6□□□□□ -1.45
USP28-203ENST00000537490 DOK5Q9P104 306 aa6□□□□□ -1.45
USP28-203ENST00000537490 YTHDF2Q9Y5A9 579 aaKnown RBP6□□□□□ -1.45
USP28-203ENST00000537490 TRAV8-2A0A0B4J237 113 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 PIGBOS1A0A0B4J2F0 54 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 TEX48A0A1B0GUV7 120 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 CRXO43186 299 aaPredicted RBP5.99□□□□□ -1.45
USP28-203ENST00000537490 CFDP00746 253 aaPredicted RBP5.99□□□□□ -1.45
USP28-203ENST00000537490 GALR1P47211 349 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 MEOX2P50222 304 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 OXA1LQ15070 435 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 RRN3P1Q2M238 152 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 SPANXN5Q5MJ07 72 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 Q6ZR54 194 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 UBE2DNLQ8IWF7 75 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 IGF2BP2-AS1Q96M15 143 aa5.99□□□□□ -1.45
USP28-203ENST00000537490 CIB3Q96Q77 187 aaPredicted RBP5.99□□□□□ -1.45
USP28-203ENST00000537490 SLC45A2Q9UMX9 530 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms