RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.4
SFSWAP-205ENST00000537164 CCSO14618 274 aa12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 CA1P00915 261 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 IL5P05113 134 aa12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 PSMG4Q5JS54 123 aa12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 TMEM182Q6ZP80 229 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
SFSWAP-205ENST00000537164 LCE6AA0A183 80 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 K7EPK0 472 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 SOCS3O14543 225 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 CCNKO75909 580 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 METTL15P1P0C7V9 234 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 PLP1P60201 277 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 IL15RAQ13261 267 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 OR10P1Q8NGE3 313 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 RARRES2Q99969 163 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 GGACTQ9BVM4 153 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 C11orf1Q9H5F2 150 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 BATF3Q9NR55 127 aa12.56□□□□□ -0.4
SFSWAP-205ENST00000537164 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 GATA2P23769 480 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 SELENOTP62341 195 aa12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 IFITM3Q01628 133 aa12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 ACTL10Q5JWF8 245 aa12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 CYP2G1PQ6ZSU1 146 aa12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 C2orf50Q96LR7 162 aa12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 C11orf68Q9H3H3 251 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-205ENST00000537164 ZNF98A6NK75 572 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 DEDDO75618 318 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 S100A7P31151 101 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 PSMB3P49720 205 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 OR8I2Q8N0Y5 310 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 OR11H2Q8NH07 326 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 GPR82Q96P67 336 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 RYR2Q92736 4967 aa12.54□□□□□ -0.4
SFSWAP-205ENST00000537164 PLECQ15149 4684 aaKnown RBP12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 SMCO3A2RU48 225 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 C5orf51A6NDU8 294 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 H3BMM0 161 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 ISLRO14498 428 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 ORM2P19652 201 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 C4BPBP20851 252 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 ID1P41134 155 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 MEOX2P50222 304 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 RRAS2P62070 204 aaPredicted RBP12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 ARL16Q0P5N6 197 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 C17orf77Q96MU5 243 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 MGAT4CQ9UBM8 478 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
SFSWAP-205ENST00000537164 DNAH1Q9P2D7 4330 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 ZNF705EA8MWA4 302 aaPredicted RBP12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 FAM25EA8MYX2 175 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 GALR1P47211 349 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 GSG1LQ6UXU4 331 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 ENKURQ8TC29 256 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 TMEM147Q9BVK8 224 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.41
SFSWAP-205ENST00000537164 H3BRN7 92 aa12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 L7N2F9 121 aa12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 VAMP2P63027 116 aa12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 SLC25A39Q9BZJ4 359 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 LSM5Q9Y4Y9 91 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-205ENST00000537164 HYPMO75409 117 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 LINC00869P0C866 280 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 NUTF2P61970 127 aaKnown RBP12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 SPATA31B1PQ5VZV4 182 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 NRARPQ7Z6K4 114 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 Q8NAQ8 132 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 GPN1Q9HCN4 374 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 LYRM2Q9NU23 88 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
SFSWAP-205ENST00000537164 NUPR2A6NF83 97 aa12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 PRAF2O60831 178 aa12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 PVALBP20472 110 aaPredicted RBP12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 RAP2BP61225 183 aa12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 GDF5OSQ5U4N7 250 aa12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 S100A7AQ86SG5 101 aa12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
SFSWAP-205ENST00000537164 AGPAT2O15120 278 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 MIFP14174 115 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 CAV2P51636 162 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 RAB32Q13637 225 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 VWC2Q2TAL6 325 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms