RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 EI24O14681 340 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 ITGB1BP1O14713 200 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 NOL3O60936 208 aaKnown RBP3.51□□□□□ -1.85
CLIP1-207ENST00000536634 PDCD6O75340 191 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 CA11O75493 328 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 IFNA10P01566 189 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 APOA2P02652 100 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 SCTP09683 121 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 IL7P13232 177 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 FUT3P21217 361 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 GALP22466 123 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 AKR1D1P51857 326 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 FLOT2Q14254 428 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 C12orf74Q32Q52 190 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 Q5BKY6 102 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 SOHLH1Q5JUK2 328 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF880Q6PDB4 577 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 GLIPR1L1Q6UWM5 242 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 SSX9Q7RTT3 188 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 SPATA12Q7Z6I5 190 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 TTC9CQ8N5M4 171 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 OR5AK2Q8NH90 309 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 OR10J5Q8NHC4 309 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 DTD1Q8TEA8 209 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 ACOT12Q8WYK0 555 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 CNBD2Q96M20 576 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 C18orf15Q96N68 181 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 S100A13Q99584 98 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 TXN2Q99757 166 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 TCEAL7Q9BRU2 100 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 C2orf88Q9BSF0 95 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 RIBC2Q9H4K1 309 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF430Q9H8G1 570 aaPredicted RBP3.51□□□□□ -1.85
CLIP1-207ENST00000536634 TMEM138Q9NPI0 162 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 PAK1IP1Q9NWT1 392 aaPredicted RBP3.51□□□□□ -1.85
CLIP1-207ENST00000536634 BABAM2Q9NXR7 383 aa3.51□□□□□ -1.85
CLIP1-207ENST00000536634 MRPL27Q9P0M9 148 aaKnown RBP3.51□□□□□ -1.85
CLIP1-207ENST00000536634 RPL36Q9Y3U8 105 aaKnown RBP3.51□□□□□ -1.85
CLIP1-207ENST00000536634 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 TRAV8-7A0A075B6U6 113 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 IGHV3OR16-8A0A075B7F1 116 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 IGKV1-6A0A0C4DH72 117 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 E7EUB6 86 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 SLC17A2O00624 439 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF207O43670 478 aaKnown RBP3.5□□□□□ -1.85
CLIP1-207ENST00000536634 AREGP15514 252 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 RPA2P15927 270 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 IGFBP3P17936 291 aaPredicted RBP3.5□□□□□ -1.85
CLIP1-207ENST00000536634 CEACAM6P40199 344 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 MAP2K4P45985 399 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 UBE2KP61086 200 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 PPP3R1P63098 170 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 SMCO1Q147U7 214 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 HSD17B12Q53GQ0 312 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 CLLU1Q5K131 121 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 Q5VSD8 79 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 KDM4DQ6B0I6 523 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 XAF1Q6GPH4 301 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 ETFRF1Q6IPR1 90 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 C6orf201Q7Z4U5 140 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 UBE2DNLQ8IWF7 75 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 EIF4E3Q8N5X7 224 aaKnown RBP3.5□□□□□ -1.85
CLIP1-207ENST00000536634 RAB2BQ8WUD1 216 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 PTX4Q96A99 478 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 ASB9Q96DX5 294 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 KIR2DL4Q99706 377 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 HDHD3Q9BSH5 251 aaPredicted RBP3.5□□□□□ -1.85
CLIP1-207ENST00000536634 FAAP24Q9BTP7 215 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 NDUFAF3Q9BU61 184 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF436Q9C0F3 470 aaPredicted RBP3.5□□□□□ -1.85
CLIP1-207ENST00000536634 MED9Q9NWA0 146 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 ABRACLQ9P1F3 81 aa3.5□□□□□ -1.85
CLIP1-207ENST00000536634 IGKV3-7A0A075B6H7 116 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 OR4C46A6NHA9 309 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 ZNF705EA8MWA4 302 aaPredicted RBP3.49□□□□□ -1.85
CLIP1-207ENST00000536634 KRBOX1C9JBD0 128 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 CHEK1O14757 476 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 TCAPO15273 167 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 RGS5O15539 181 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 UPK1BO75841 260 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 NAPSAO96009 420 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 REG1AP05451 166 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 CTSDP07339 412 aaPredicted RBP3.49□□□□□ -1.85
CLIP1-207ENST00000536634 LINC00614P0C842 121 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 SAA1P0DJI8 122 aaPredicted RBP3.49□□□□□ -1.85
CLIP1-207ENST00000536634 RRASP10301 218 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 G0S2P27469 103 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 NUP62P37198 522 aaPredicted RBP3.49□□□□□ -1.85
CLIP1-207ENST00000536634 TFPI2P48307 235 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 HLA-DRB3P79483 266 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 BTN1A1Q13410 526 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 GPR176Q14439 515 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 OR10K2Q6IF99 312 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 SYS1Q8N2H4 156 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 ACBD7Q8N6N7 88 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 PACRGLQ8N7B6 248 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 OR8J1Q8NGP2 316 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 EEF1AKMT3Q96AZ1 226 aa3.49□□□□□ -1.85
CLIP1-207ENST00000536634 RNF2Q99496 336 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms