RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 C16orf54Q6UWD8 224 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 SEPSECSQ9HD40 501 aaKnown RBP9.16□□□□□ -0.94
PRKDC-207ENST00000536483 UBQLN2Q9UHD9 624 aa9.16□□□□□ -0.94
PRKDC-207ENST00000536483 HELTA6NFD8 242 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 K7EQG2 157 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 SPRY2O43597 315 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 BUB3O43684 328 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 HOXB5P09067 269 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 PET100P0DJ07 73 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 PSG1P11464 419 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 ATF4P18848 351 aaPredicted RBP9.15□□□□□ -0.94
PRKDC-207ENST00000536483 P2RY1P47900 373 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 AP2S1P53680 142 aaPredicted RBP9.15□□□□□ -0.94
PRKDC-207ENST00000536483 USF2Q15853 346 aaPredicted RBP9.15□□□□□ -0.94
PRKDC-207ENST00000536483 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 CLLU1Q5K131 121 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 OR8G2PQ6IF36 304 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 ZNF546Q86UE3 836 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 SLC51BQ86UW2 128 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 THAP8Q8NA92 274 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 OR4D5Q8NGN0 318 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 THAP6Q8TBB0 222 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 DCANP1Q8TF63 244 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 GLMPQ8WWB7 406 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 RNF183Q96D59 192 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 ACY3Q96HD9 319 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 NARS2Q96I59 477 aaKnown RBP9.15□□□□□ -0.94
PRKDC-207ENST00000536483 TRGV9Q99603 122 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 MFFQ9GZY8 342 aa9.15□□□□□ -0.94
PRKDC-207ENST00000536483 LINC00862A6NCI5 91 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 ADAP1O75689 374 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 CXCL2P19875 107 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 ACOT7LQ6ZUV0 252 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 TMUB2Q71RG4 321 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 RPP25LQ8N5L8 163 aaKnown RBP9.14□□□□□ -0.95
PRKDC-207ENST00000536483 STPG3Q8N7X2 389 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 OR51G1Q8NGK1 321 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 C2orf50Q96LR7 162 aa9.14□□□□□ -0.95
PRKDC-207ENST00000536483 IGKV1OR2-108A0A075B7D4 117 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 FXYD6-FXYD2A0A087WZ82 144 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 MPTX1A8MV57 137 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 DNASE2O00115 360 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-207ENST00000536483 ARPC5O15511 151 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 SIX6O95475 246 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 CFDP00746 253 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-207ENST00000536483 IFNA21P01568 189 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 IL4P05112 153 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 FABP1P07148 127 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 IAPPP10997 89 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 NUP62P37198 522 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-207ENST00000536483 TAS2R30P59541 319 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 C1orf194Q5T5A4 169 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 APRG1Q8IVJ8 170 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 KCNRGQ8N5I3 272 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 INO80EQ8NBZ0 244 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-207ENST00000536483 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 RNF125Q96EQ8 232 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 PHYHIPLQ96FC7 376 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 SLC35E1Q96K37 410 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 SMIM8Q96KF7 97 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 CSTL1Q9H114 145 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 MED9Q9NWA0 146 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 TNFSF18Q9UNG2 199 aa9.13□□□□□ -0.95
PRKDC-207ENST00000536483 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-207ENST00000536483 C5orf51A6NDU8 294 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 PMS2P5A8MQ11 134 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 TSC22D2O75157 780 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 MPC2O95563 127 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
PRKDC-207ENST00000536483 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
PRKDC-207ENST00000536483 TFPI2P48307 235 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 PAX9P55771 341 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 SLC7A5P1Q8MH63 180 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 FAM24BQ8N5W8 94 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 GATAD1Q8WUU5 269 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 ARL6Q9H0F7 186 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 MAGT1Q9H0U3 335 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 SLC45A2Q9UMX9 530 aa9.12□□□□□ -0.95
PRKDC-207ENST00000536483 VPS13DQ5THJ4 4388 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 IGKV3-7A0A075B6H7 116 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 KANTRA0A1W2PQU2 76 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 ZFP92A6NM28 416 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 FNDC10F2Z333 226 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 WRBO00258 174 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 DEDDO75618 318 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 DEFB131AP59861 70 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 POLR2GP62487 172 aaKnown RBP eCLIP9.11□□□□□ -0.95
PRKDC-207ENST00000536483 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
PRKDC-207ENST00000536483 EIF5AP63241 154 aaKnown RBP9.11□□□□□ -0.95
PRKDC-207ENST00000536483 ZNF90Q03938 601 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 IL15RAQ13261 267 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 ZNF124Q15973 351 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 TMEM14EPQ6UXP3 125 aa9.11□□□□□ -0.95
PRKDC-207ENST00000536483 STRAPQ9Y3F4 350 aaKnown RBP9.11□□□□□ -0.95
PRKDC-207ENST00000536483 TAAR5O14804 337 aa9.1□□□□□ -0.95
PRKDC-207ENST00000536483 RLN2P04090 185 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms