RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 FCGR3BO75015 233 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 SP1P08047 785 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CT45A6P0DMU7 189 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CT45A5P0DMU8 189 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CT45A7P0DMV0 189 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 GDF1P27539 372 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 SSTR5P35346 364 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CYB561P49447 251 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 SUB1P53999 127 aaKnown RBP eCLIP5.31□□□□□ -1.56
USP28-202ENST00000535607 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
USP28-202ENST00000535607 Q0VFX4 171 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 SLAQ13239 276 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CT45A1Q5HYN5 189 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 NUP35Q8NFH5 326 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 OR1B1Q8NGR6 318 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 OR2K2Q8NGT1 345 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CT45A3Q8NHU0 189 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 FGFBP3Q8TAT2 258 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CACNG8Q8WXS5 425 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 H1FXQ92522 213 aaKnown RBP5.31□□□□□ -1.56
USP28-202ENST00000535607 NEUROG1Q92886 237 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 FMC1Q96HJ9 113 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 ZNF488Q96MN9 340 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 CXXC4Q9H2H0 198 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 RPP21Q9H633 154 aaKnown RBP5.31□□□□□ -1.56
USP28-202ENST00000535607 PLSCR4Q9NRQ2 329 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 DEPPQ9NTK1 212 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 ZNF492Q9P255 531 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 GNG12Q9UBI6 72 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 PSG11Q9UQ72 335 aa5.31□□□□□ -1.56
USP28-202ENST00000535607 DMXL2Q8TDJ6 3036 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 IGHV1-24A0A0C4DH33 117 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 PSMB11A5LHX3 300 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 K7ENP7 123 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 PEX7O00628 323 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 COX7A2P2O60397 106 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 P01737 135 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 GPR6P46095 362 aaPredicted RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 CAMPP49913 170 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 FABP6P51161 128 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 RPL8P62917 257 aaKnown RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 SLC35B1P78383 322 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 RIGQ13278 110 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 SPINK9Q5DT21 86 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 TIMM23BQ5SRD1 257 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 Q6AWC8 147 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 IGFL2Q6UWQ7 119 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 IGFL3Q6UXB1 125 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 RBPMS2Q6ZRY4 209 aaKnown RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 MIR17HGQ75NE6 70 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 YRDCQ86U90 279 aaKnown RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 ZNF714Q96N38 554 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 FGF23Q9GZV9 251 aaPredicted RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 ZNF355PQ9NSJ1 428 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 IDI2-AS1Q9NZ38 188 aa5.3□□□□□ -1.56
USP28-202ENST00000535607 KLF13Q9Y2Y9 288 aaPredicted RBP5.3□□□□□ -1.56
USP28-202ENST00000535607 LOC400499M0QZD8 3231 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 ZFHX4Q86UP3 3567 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 CELSR3Q9NYQ7 3312 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 A0A0G2JLM5 398 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 A0A0G2JMM0 328 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 A0A1W2PPB8 328 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 KIR3DP1A8MWS1 328 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 IQCF6A8MYZ5 107 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 FOXH1O75593 365 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 IGLV2-8P01709 118 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 SMIM13P0DJ93 91 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 CT45A10P0DMU9 189 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 DEFA4P12838 97 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 ERHP84090 104 aaKnown RBP5.29□□□□□ -1.56
USP28-202ENST00000535607 SCGB2A2Q13296 93 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 MAJINQ3KP22 176 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 C2orf83Q53S99 150 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 C1orf185Q5T7R7 199 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 ATP1A1-AS1Q5TC04 95 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 LINC01545Q5VT33 79 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 C10orf113Q5VZT2 155 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 UFSP1Q6NVU6 142 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 NEGR1Q7Z3B1 354 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 PDPNQ86YL7 162 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 ABHD12Q8N2K0 398 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 C5orf17Q8NAS9 161 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 TMEM178AQ8NBL3 297 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 OR1L8Q8NGR8 309 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 SNRNP40Q96DI7 357 aaKnown RBP5.29□□□□□ -1.56
USP28-202ENST00000535607 GPR82Q96P67 336 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 SLC25A33Q9BSK2 321 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 PAXXQ9BUH6 204 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 VCX2Q9H322 139 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 PROK2Q9HC23 129 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 TMEM14BQ9NUH8 114 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 SPCS1Q9Y6A9 102 aa5.29□□□□□ -1.56
USP28-202ENST00000535607 APC2O95996 2303 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 LOC102724200A0A096LPH7 203 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms