RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 SRRQ9GZT4 340 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 TBC1D24Q9ULP9 559 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 SNRPGP15A8MWD9 76 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 RTL8CO15255 209 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 SYNGR2O43760 224 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 VAMP1P23763 118 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 S100A5P33763 92 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 UBE2MP61081 183 aaKnown RBP7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 NUTF2P61970 127 aaKnown RBP7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 ID3Q02535 119 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 GGNBP1Q5YKI7 109 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF705AQ6ZN79 300 aaPredicted RBP7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 Q6ZTC4 211 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 CENPSQ8N2Z9 138 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 MAPKAPK5-AS1Q8N8E1 139 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 CIB3Q96Q77 187 aaPredicted RBP7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 NEU1Q99519 415 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 SDHCQ99643 169 aaPredicted RBP7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 PBDC1Q9BVG4 233 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 C1QTNF4Q9BXJ3 329 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 SAV1Q9H4B6 383 aaPredicted RBP7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 PFDN2Q9UHV9 154 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 CELA1Q9UNI1 258 aa7.23□□□□□ -1.25
CLSTN3-203ENST00000534830 C9orf170A2RU37 121 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 PMS2P5A8MQ11 134 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 A8MTW9 85 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 M0R2N4 97 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 CFDP00746 253 aaPredicted RBP7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 FABP1P07148 127 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 HOXB5P09067 269 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF705DP0CH99 300 aaPredicted RBP7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF705BP0CI00 300 aaPredicted RBP7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 PSMB3P49720 205 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 PAX9P55771 341 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 DEFB1P60022 68 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 LYZP61626 148 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 RPP30P78346 268 aaKnown RBP7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 BAK1Q16611 211 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 C12orf74Q32Q52 190 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 TMEM182Q6ZP80 229 aaPredicted RBP7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 FOXI2Q6ZQN5 318 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF709Q8N972 641 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 XCL2Q9UBD3 114 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 SLC45A2Q9UMX9 530 aa7.22□□□□□ -1.25
CLSTN3-203ENST00000534830 TRAV10A0A0B4J240 114 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 NAP1L6A6NFF2 107 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 WRBO00258 174 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 NDUFB6O95139 128 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 BTCP35070 178 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 ID1P41134 155 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 OR2F1Q13607 317 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 OR4D5Q8NGN0 318 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 C20orf173Q96LM9 149 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 MAGT1Q9H0U3 335 aa7.21□□□□□ -1.26
CLSTN3-203ENST00000534830 IGHV4-4A0A075B6R2 117 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 CCDC160A6NGH7 325 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 SMIM9A6NGZ8 99 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 ZNF98A6NK75 572 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 ISLRO14498 428 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 ADAP1O75689 374 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 GATA2P23769 480 aaPredicted RBP7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 SPANXN5Q5MJ07 72 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 SPANXN2Q5MJ10 180 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 SPATA31B1PQ5VZV4 182 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 GSG1LQ6UXU4 331 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 TMEM144Q7Z5S9 345 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 OR8I2Q8N0Y5 310 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 LINC00052Q96N35 136 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 RNF126Q9BV68 326 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 FLVCR2Q9UPI3 526 aa7.2□□□□□ -1.26
CLSTN3-203ENST00000534830 A0A0J9YX75 114 aa7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 OR4E1P0C645 316 aa7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 PLP1P60201 277 aa7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 POLR2GP62487 172 aaKnown RBP eCLIP7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 SAMD13Q5VXD3 122 aa7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 SMIM8Q96KF7 97 aa7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 SLC25A32Q9H2D1 315 aa7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 PAIP2BQ9ULR5 123 aaKnown RBP7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 STRAPQ9Y3F4 350 aaKnown RBP7.19□□□□□ -1.26
CLSTN3-203ENST00000534830 DEFB131BA0A096LNP1 70 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 FNDC10F2Z333 226 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 F6UB75 175 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 H3BP45 60 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 AMBPP02760 352 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 GALR1P47211 349 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 MEOX2P50222 304 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 FXYD7P58549 80 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 PSG9Q00887 426 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 FAM78BQ5VT40 261 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 AMTNQ6UX39 209 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 TMEM14EPQ6UXP3 125 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 ACOT7LQ6ZUV0 252 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 C1orf158Q8N1D5 194 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 OR1B1Q8NGR6 318 aa7.18□□□□□ -1.26
CLSTN3-203ENST00000534830 C7orf50Q9BRJ6 194 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms