RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 IGHV3OR16-13A0A075B7E8 117 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 IGHV3-74A0A0B4J1X5 117 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 GIG44P09565 113 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-217ENST00000534699 PSMG4Q5JS54 123 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 EBLN2Q6P2I7 272 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 TMEM14EPQ6UXP3 125 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 FAM24BQ8N5W8 94 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 S100ZQ8WXG8 99 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 NPVFQ9HCQ7 196 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 RFNGQ9Y644 331 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 DEDDO75618 318 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 RPL7P18124 248 aaKnown RBP7.55□□□□□ -1.2
CSDE1-217ENST00000534699 PSENENQ9NZ42 101 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 MGAT4CQ9UBM8 478 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 X6R8D5 127 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 IGKV3-7A0A075B6H7 116 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 IGHV3-66A0A0C4DH42 116 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 LYZP61626 148 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 ACTL10Q5JWF8 245 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 LEMD1Q68G75 181 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF705AQ6ZN79 300 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-217ENST00000534699 CYP2G1PQ6ZSU1 146 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 OR8I2Q8N0Y5 310 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 PPP1R14BQ96C90 147 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 GOLT1BQ9Y3E0 138 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 SELENOKQ9Y6D0 94 aa7.55□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF705FA8MVS1 300 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-217ENST00000534699 HOXB5P09067 269 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF705DP0CH99 300 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF705BP0CI00 300 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-217ENST00000534699 IL7P13232 177 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 ACOT7LQ6ZUV0 252 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF546Q86UE3 836 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 OR10P1Q8NGE3 313 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 H3BRN7 92 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 IAPPP10997 89 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 RAP2BP61225 183 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 PSG9Q00887 426 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 ZBTB8BQ8NAP8 495 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-217ENST00000534699 C20orf144Q9BQM9 153 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 SHANK2-AS3Q9BTD1 123 aa7.54□□□□□ -1.2
CSDE1-217ENST00000534699 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 KNCNA6PVL3 124 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 HYPMO75409 117 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 C4BPBP20851 252 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 AKR1C1Q04828 323 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF124Q15973 351 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 BAK1Q16611 211 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 SPANXN5Q5MJ07 72 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 SDHCQ99643 169 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-217ENST00000534699 PRR13Q9NZ81 148 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 HIGD1AQ9Y241 93 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF90Q03938 601 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 RAB31Q13636 194 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 ZNF846Q147U1 533 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 MZT2BQ6NZ67 158 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 PBDC1Q9BVG4 233 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 DOK5Q9P104 306 aa7.53□□□□□ -1.2
CSDE1-217ENST00000534699 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-217ENST00000534699 A0A0J9YX75 114 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 IL5P05113 134 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 PVALBP20472 110 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-217ENST00000534699 BTCP35070 178 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 ATP6V1FQ16864 119 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 TEPPQ6URK8 271 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 TMEM256Q8N2U0 113 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 LYRM1O43325 122 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 SPART-AS1P0CW21 52 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.21
CSDE1-217ENST00000534699 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 TSPOP30536 169 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 FAM3BP58499 235 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-217ENST00000534699 PMS2P11Q13670 270 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 RBMY1FQ15415 496 aaKnown RBP7.52□□□□□ -1.21
CSDE1-217ENST00000534699 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-217ENST00000534699 APLNQ9ULZ1 77 aa7.52□□□□□ -1.21
CSDE1-217ENST00000534699 IGKV1OR2-108A0A075B7D4 117 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 GUK1Q16774 197 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 IAH1Q2TAA2 248 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-217ENST00000534699 C12orf45Q8N5I9 185 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-217ENST00000534699 C16orf92Q96LL3 132 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 IGF2BP2-AS1Q96M15 143 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 SLC25A32Q9H2D1 315 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 ZNF253O75346 499 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 EWSR1Q01844 656 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSDE1-217ENST00000534699 C2orf50Q96LR7 162 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 C20orf85Q9H1P6 137 aa7.51□□□□□ -1.21
CSDE1-217ENST00000534699 L7N2F9 121 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 MPDU1O75352 247 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 LY6G6CO95867 125 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 TCRBP04435 133 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 VAMP2P63027 116 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 OR1L4Q8NGR5 311 aa7.5□□□□□ -1.21
CSDE1-217ENST00000534699 SLC25A39Q9BZJ4 359 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-217ENST00000534699 WDR12Q9GZL7 423 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms