RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 VWC2LB2RUY7 222 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 PPIAL4DF5H284 164 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 H0YJW9 148 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 PSG1P11464 419 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 TMEM11P17152 192 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 TNFRSF1AP19438 455 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 CNTFRP26992 372 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
RAG1-203ENST00000534663 VSTM2AQ8TAG5 236 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 IGFBPL1Q8WX77 278 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 CACNG8Q8WXS5 425 aa5.52□□□□□ -1.53
RAG1-203ENST00000534663 IGHV3-35A0A0C4DH35 117 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 IGLV1-44P01699 117 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 TM4SF20Q53R12 229 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 LRRC10Q5BKY1 277 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 LYPD2Q6UXB3 125 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 TMUB1Q9BVT8 246 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 MRPL27Q9P0M9 148 aaKnown RBP5.51□□□□□ -1.53
RAG1-203ENST00000534663 NOTCH3Q9UM47 2321 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 PTPRBP23467 1997 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 IGHV1-24A0A0C4DH33 117 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 A0A1W2PPI3 338 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 SYS1-DBNDD2H3BUS1 97 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 APOHP02749 345 aaPredicted RBP5.51□□□□□ -1.53
RAG1-203ENST00000534663 SP9P0CG40 484 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 RPL27AP46776 148 aaKnown RBP5.51□□□□□ -1.53
RAG1-203ENST00000534663 COTL1Q14019 142 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 AARDQ4LEZ3 155 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 RUSC1-AS1Q66K80 236 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 TMEM200BQ69YZ2 307 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 FXYD5Q96DB9 178 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 DKK4Q9UBT3 224 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 PPIAL4EA0A075B759 164 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 LYNX1G3V0Z9 82 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 PPIAL4FP0DN26 164 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 LYNX1P0DP58 116 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 HES1Q14469 280 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 TIMM23BQ5SRD1 257 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 ZNF788Q6ZQV5 615 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 Q71RC1 249 aaPredicted RBP5.51□□□□□ -1.53
RAG1-203ENST00000534663 TEX45Q8NA69 505 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 FBXL15Q9H469 300 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 PPP1R14DQ9NXH3 145 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 HILPDAQ9Y5L2 63 aa5.51□□□□□ -1.53
RAG1-203ENST00000534663 IGHV2-26A0A0B4J1V2 119 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 IGHG3P01860 377 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 CD40P25942 277 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 ARF6P62330 175 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 MRPL52Q86TS9 123 aaKnown RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 RASL11BQ9BPW5 248 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 HIGD1AQ9Y241 93 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 MRPS16Q9Y3D3 137 aaKnown RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 IGHV1-69-2A0A0G2JMI3 117 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 C2orf70A6NJV1 201 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 RBPMS2Q6ZRY4 209 aaKnown RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 C5orf17Q8NAS9 161 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 GTSF1Q8WW33 167 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 INSIG2Q9Y5U4 225 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 LINC00312Q9Y6C7 94 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 MAP1AP78559 2803 aaPredicted RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 FBLL1A6NHQ2 334 aaKnown RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 M0R3E3 92 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 CRYABP02511 175 aaKnown RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 TCRAP04437 139 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 CGB3P0DN86 165 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 CGB7P0DN87 165 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 BPIFA4PQ86YQ2 179 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 STXBP6Q8NFX7 210 aa5.5□□□□□ -1.53
RAG1-203ENST00000534663 F11RQ9Y624 299 aaKnown RBP5.5□□□□□ -1.53
RAG1-203ENST00000534663 IGLC7A0M8Q6 106 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 C22orf46C9J442 243 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 KLK10O43240 276 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 LHBP01229 141 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 HLA-DRB1P01911 266 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 ARMS2P0C7Q2 107 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 NMUP48645 174 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 KLF17Q5JT82 389 aaPredicted RBP5.49□□□□□ -1.53
RAG1-203ENST00000534663 SEM1Q6ZVN7 128 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 DSCAML1Q8TD84 2053 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 IGHV3-23P01764 117 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 LIPFP07098 398 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 FCGR2BP31994 310 aaPredicted RBP5.49□□□□□ -1.53
RAG1-203ENST00000534663 FAM162BQ5T6X4 162 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 C17orf77Q96MU5 243 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 C18orf15Q96N68 181 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 ZNF883P0CG24 379 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 C12orf54Q6X4T0 127 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 RPEQ96AT9 228 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 MBD6Q96DN6 1003 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 HSPB8Q9UJY1 196 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 CSMD1Q96PZ7 3565 aa5.49□□□□□ -1.53
RAG1-203ENST00000534663 IGKV1D-37A0A075B6S9 117 aa5.48□□□□□ -1.53
RAG1-203ENST00000534663 FNDC10F2Z333 226 aa5.48□□□□□ -1.53
RAG1-203ENST00000534663 TM4SF5O14894 197 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms