RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 TWIST2Q8WVJ9 160 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 RTN4IP1Q8WWV3 396 aaPredicted RBP2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 MS4A6EQ96DS6 147 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 AMELYQ99218 206 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 NDUFB11Q9NX14 153 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 CCDC167Q9P0B6 97 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 CD163L1Q9NR16 1453 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 CPS1P31327 1500 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 CICQ96RK0 1608 aaPredicted RBP2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 ALS2Q96Q42 1657 aa2.3□□□□□ -2.04
ATPAF1-211ENST00000534216 PLXNB3Q9ULL4 1909 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 LY75O60449 1722 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 NRAPQ86VF7 1730 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 A0A087X0T9 212 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TRAV14DV4A0A0A6YYC5 116 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TRAV5A0A0B4J249 113 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TRAV26-2A0A0B4J265 109 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 LOC107986453A0A1B0GWG9 222 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TCRBV9S1A1TA0A576 114 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SNRPGP15A8MWD9 76 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 H3BRM9 83 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 M0R1X1 148 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 IL5P05113 134 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 LINC00869P0C866 280 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 P0DMU3 169 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FAM231AP0DMU4 169 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FAM231CP0DMU5 169 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FGF6P10767 208 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SLC25A4P12235 298 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 CTLA4P16410 223 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FKBP2P26885 142 aaKnown RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 PFN2P35080 140 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 OPRK1P41145 380 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FABP6P51161 128 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 POLR2JP52435 117 aaKnown RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SP4Q02446 784 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SLC25A11Q02978 314 aaKnown RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 LOXL1Q08397 574 aaPredicted RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 IGFBP7Q16270 282 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SP6Q3SY56 376 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 Q499Y3 187 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SPRNQ5BIV9 151 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 UBE2NLQ5JXB2 153 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FAM201AQ5SY85 155 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 LCN8Q6JVE9 175 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ZFP2Q6ZN57 461 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 SHISA6Q6ZSJ9 500 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TMEM150AQ86TG1 271 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 C10orf111Q8N326 155 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ZNF555Q8NEP9 628 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ATP6V0E2Q8NHE4 81 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 KLK6Q92876 244 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 MAL2Q969L2 176 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 DPH3Q96FX2 82 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 FMC1Q96HJ9 113 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 GPR21Q99679 349 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 C20orf78Q9BR46 151 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ZNF670Q9BS34 389 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 EMC6Q9BV81 110 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 GNB1LQ9BYB4 327 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ULBP3Q9BZM4 244 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TCEAL2Q9H3H9 227 aaPredicted RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 REEP1Q9H902 201 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ST20Q9HBF5 79 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 BCL2L10Q9HD36 194 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 C21orf62Q9NYP8 219 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 TRMT112Q9UI30 125 aaKnown RBP2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 ASF1AQ9Y294 204 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 MPC1Q9Y5U8 109 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 HEBP2Q9Y5Z4 205 aa2.29□□□□□ -2.04
ATPAF1-211ENST00000534216 CPAMD8Q8IZJ3 1885 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 ZNF236Q9UL36 1845 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 C10orf71Q711Q0 1435 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 IGLV4-69A0A075B6H9 119 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 IGHV3OR16-13A0A075B7E8 117 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 FXYD6-FXYD2A0A087WZ82 144 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 MUC21A0A140T8X8 626 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 KANTRA0A1W2PQU2 76 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 MEIS3P1A6NDR6 274 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 ARRDC5A6NEK1 342 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 ZNF727A8MUV8 499 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 UMAD1C9J7I0 102 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 TMEM262E9PQX1 116 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 TMEM250H0YL14 139 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 MRPS12O15235 138 aaKnown RBP2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 SOCS1O15524 211 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 PROSCO94903 275 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 NDUFB6O95139 128 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 NDUFC2O95298 119 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 CA2P00918 260 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 OR5AL1P0C617 328 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 SDC2P34741 201 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 LPAR6P43657 344 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 MARCKSL1P49006 195 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 P2RX1P51575 399 aa2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 FOXA3P55318 350 aaPredicted RBP2.28□□□□□ -2.04
ATPAF1-211ENST00000534216 FBXW4P57775 412 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms