RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SCGB1D2O95969 90 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 METTL15P1P0C7V9 234 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 SLC25A6P12236 298 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 EIF2B2P49770 351 aaKnown RBP6.95□□□□□ -1.3
SSBP3-215ENST00000533946 OR8G2PQ6IF36 304 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 ETFRF1Q6IPR1 90 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 PATE2Q6UY27 113 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 RNF182Q8N6D2 247 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 SLC35E1Q96K37 410 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 LINC00052Q96N35 136 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 TRGV9Q99603 122 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 SLC35B3Q9H1N7 401 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 NRN1Q9NPD7 142 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 TBC1D24Q9ULP9 559 aa6.95□□□□□ -1.3
SSBP3-215ENST00000533946 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 PKD1P98161 4303 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 MBPP02686 304 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-215ENST00000533946 ORM2P19652 201 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 C4orf46Q504U0 113 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 MORN5Q5VZ52 161 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 ZBTB8BQ8NAP8 495 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-215ENST00000533946 UHRF2Q96PU4 802 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 C20orf85Q9H1P6 137 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 C11orf1Q9H5F2 150 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 TMEM231Q9H6L2 316 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 SLC25A22Q9H936 323 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 PSENENQ9NZ42 101 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 GSKIPQ9P0R6 139 aa6.94□□□□□ -1.3
SSBP3-215ENST00000533946 DNAH11Q96DT5 4516 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 DYNC1H1Q14204 4646 aaKnown RBP6.93□□□□□ -1.3
SSBP3-215ENST00000533946 ZNF98A6NK75 572 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 ZNF705EA8MWA4 302 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-215ENST00000533946 H3BTX0 84 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 LYRM1O43325 122 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 TCRBP04435 133 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-215ENST00000533946 INPP1P49441 399 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 SLC38A11Q08AI6 406 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 IAH1Q2TAA2 248 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-215ENST00000533946 CNPY1Q3B7I2 92 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 TMEM14EPQ6UXP3 125 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 Q6ZTC4 211 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 C11orf45Q8TAV5 145 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 GATAD1Q8WUU5 269 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 MITD1Q8WV92 249 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 RSG1Q9BU20 258 aa6.93□□□□□ -1.3
SSBP3-215ENST00000533946 STRAPQ9Y3F4 350 aaKnown RBP6.93□□□□□ -1.3
SSBP3-215ENST00000533946 SMCO3A2RU48 225 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 C7orf66A4D0T2 115 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 NAP1L6A6NFF2 107 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 SNRPGP15A8MWD9 76 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 HLA-DRB4P13762 266 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 CMC4P56277 68 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-215ENST00000533946 RAB11AP62491 216 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 AKR1C1Q04828 323 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 OR1B1Q8NGR6 318 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 SMIM8Q96KF7 97 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 C11orf68Q9H3H3 251 aaKnown RBP6.92□□□□□ -1.3
SSBP3-215ENST00000533946 NUDT15Q9NV35 164 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 HLA-DRB4X5D2U9 266 aa6.92□□□□□ -1.3
SSBP3-215ENST00000533946 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 FAM24AA6NFZ4 105 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 A6NHS1 94 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 MED6O75586 246 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 JTBO76095 146 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 SIX6O95475 246 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 CD5P06127 495 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 FAM78BQ5VT40 261 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 AMTNQ6UX39 209 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 CYP2G1PQ6ZSU1 146 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 NOXA1Q86UR1 476 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 OR8I2Q8N0Y5 310 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 OR4B1Q8NGF8 309 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 COQ8AQ8NI60 647 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 PPP1R14BQ96C90 147 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 NARS2Q96I59 477 aaKnown RBP6.91□□□□□ -1.3
SSBP3-215ENST00000533946 SAV1Q9H4B6 383 aaPredicted RBP6.91□□□□□ -1.3
SSBP3-215ENST00000533946 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 PKHD1P08F94 4074 aa6.91□□□□□ -1.3
SSBP3-215ENST00000533946 TRAV5A0A0B4J249 113 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 A0A0J9YX75 114 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 IGSF23A1L1A6 192 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 NUPR2A6NF83 97 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 FAM25EA8MYX2 175 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 H3BRN7 92 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 K7EPK0 472 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 MRPS12O15235 138 aaKnown RBP6.9□□□□□ -1.3
SSBP3-215ENST00000533946 CST7O76096 145 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 LINC00869P0C866 280 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 SPP1P10451 314 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 EMP1P54849 157 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 IL15RAQ13261 267 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 TMEM144Q7Z5S9 345 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 BPIFCQ8NFQ6 507 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 DEDD2Q8WXF8 326 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms