RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMEM200BQ69YZ2 307 aa15.59■□□□□ 0.09
CAPN1-226ENST00000533820 LYPD2Q6UXB3 125 aa15.59■□□□□ 0.09
CAPN1-226ENST00000533820 LINC00305Q7Z4B0 112 aa15.59■□□□□ 0.09
CAPN1-226ENST00000533820 NUP35Q8NFH5 326 aa15.59■□□□□ 0.09
CAPN1-226ENST00000533820 C18orf32Q8TCD1 76 aa15.59■□□□□ 0.09
CAPN1-226ENST00000533820 PEX7O00628 323 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 PMCHL1Q16048 86 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 FNDC10F2Z333 226 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 OR10J3Q5JRS4 329 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 TCF24Q7RTU0 167 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 FAM169BQ8N8A8 192 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF714Q96N38 554 aa15.58■□□□□ 0.08
CAPN1-226ENST00000533820 NAA38Q9BRA0 125 aaKnown RBP15.58■□□□□ 0.08
CAPN1-226ENST00000533820 PSMB11A5LHX3 300 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 CGB1A6NKQ9 187 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 HSBP1O75506 76 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 FOXA3P55318 350 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF329Q86UD4 541 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 SPACA3Q8IXA5 215 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 THYN1Q9P016 225 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 LRBAP50851 2863 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 CUL9Q8IWT3 2517 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 MED13LQ71F56 2210 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 SH2D7A6NKC9 451 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-226ENST00000533820 HIGD1CA8MV81 97 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 SLC25A5P05141 298 aaKnown RBP15.57■□□□□ 0.08
CAPN1-226ENST00000533820 OSR1Q8TAX0 266 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-226ENST00000533820 CHRDL1Q9BU40 450 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 CLEC7AQ9BXN2 247 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 LINC00312Q9Y6C7 94 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 GAGE10A6NGK3 116 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF841Q6ZN19 808 aa15.57■□□□□ 0.08
CAPN1-226ENST00000533820 UBE2G1P62253 170 aa15.56■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF833PQ6ZTB9 187 aa15.56■□□□□ 0.08
CAPN1-226ENST00000533820 PNKDQ8N490 385 aa15.56■□□□□ 0.08
CAPN1-226ENST00000533820 ATP6V0BQ99437 205 aa15.56■□□□□ 0.08
CAPN1-226ENST00000533820 PGPA6NDG6 321 aa15.56■□□□□ 0.08
CAPN1-226ENST00000533820 TIMM8BQ9Y5J9 83 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-226ENST00000533820 ARL2-SNX15V9GYD0 113 aa15.56■□□□□ 0.08
CAPN1-226ENST00000533820 TBR1Q16650 682 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF48Q96MX3 618 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-226ENST00000533820 C19orf24Q9BVV8 132 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 IGKV1D-37A0A075B6S9 117 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 VWC2LB2RUY7 222 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 TM4SF5O14894 197 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 CEP295Q9C0D2 2601 aa15.55■□□□□ 0.08
CAPN1-226ENST00000533820 M0R2Z0 102 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 OR4C13Q8NGP0 309 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 CACNG8Q8WXS5 425 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 FXYD5Q96DB9 178 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 ASCL2Q99929 193 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 MRPL32Q9BYC8 188 aaKnown RBP15.54■□□□□ 0.08
CAPN1-226ENST00000533820 PPIAL4EA0A075B759 164 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 PPIAL4CA0A0B4J2A2 164 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 PPIAL4DF5H284 164 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 IGLC1P0CG04 106 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 PPIAL4FP0DN26 164 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF137PP52743 207 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 BVES-AS1Q5T3Y7 98 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 KIR3DL3Q8N743 410 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 A0A1W2PPI3 338 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 OR5AN1Q8NGI8 311 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 ZNF292O60281 2723 aa15.54■□□□□ 0.08
CAPN1-226ENST00000533820 RELNP78509 3460 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 TCRBV4S1A1TA0A5B7 111 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 CNTFRP26992 372 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 PDPNQ86YL7 162 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 LINC00322Q6ZN03 302 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-226ENST00000533820 DEFB125Q8N687 156 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 TNFRSF19Q9NS68 423 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 CACNA1BQ00975 2339 aa15.53■□□□□ 0.08
CAPN1-226ENST00000533820 FAM87AP0C7U9 286 aa15.52■□□□□ 0.08
CAPN1-226ENST00000533820 CA7P43166 264 aa15.52■□□□□ 0.08
CAPN1-226ENST00000533820 Q71RC1 249 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-226ENST00000533820 TLN1Q9Y490 2541 aaKnown RBP15.52■□□□□ 0.08
CAPN1-226ENST00000533820 TRAV9-2A0A087WT02 112 aa15.52■□□□□ 0.08
CAPN1-226ENST00000533820 ADIPOQQ15848 244 aa15.52■□□□□ 0.08
CAPN1-226ENST00000533820 EBLN2Q6P2I7 272 aa15.52■□□□□ 0.08
CAPN1-226ENST00000533820 OR1L4Q8NGR5 311 aa15.52■□□□□ 0.08
CAPN1-226ENST00000533820 TNFRSF1AP19438 455 aa15.52■□□□□ 0.07
CAPN1-226ENST00000533820 CKS1BP61024 79 aa15.52■□□□□ 0.07
CAPN1-226ENST00000533820 ZNF835Q9Y2P0 537 aa15.52■□□□□ 0.07
CAPN1-226ENST00000533820 TRAV8-1A0A0A6YYK1 113 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 C17orf100A8MU93 164 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 BSPH1Q075Z2 132 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 TMEM177Q53S58 311 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 PGLYRP4Q96LB8 373 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 SMPXQ9UHP9 88 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 WNK2Q9Y3S1 2297 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 ZNF207O43670 478 aaKnown RBP15.51■□□□□ 0.07
CAPN1-226ENST00000533820 LINC00574Q9H8X3 128 aa15.51■□□□□ 0.07
CAPN1-226ENST00000533820 SUB1P53999 127 aaKnown RBP eCLIP15.5■□□□□ 0.076e-7■□□□□ 8.8
CAPN1-226ENST00000533820 COX19Q49B96 90 aa15.5■□□□□ 0.07
CAPN1-226ENST00000533820 TEX36Q5VZQ5 186 aa15.5■□□□□ 0.07
CAPN1-226ENST00000533820 TMEM167AQ8TBQ9 72 aa15.5■□□□□ 0.07
CAPN1-226ENST00000533820 GRAMD2BQ96HH9 432 aa15.5■□□□□ 0.07
CAPN1-226ENST00000533820 H0Y8G0 127 aa15.5■□□□□ 0.07
CAPN1-226ENST00000533820 RPL24P83731 157 aaKnown RBP15.5■□□□□ 0.07
CAPN1-226ENST00000533820 MBD6Q96DN6 1003 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms