RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 OMPP47874 163 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 IMPG1Q17R60 797 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 TEN1Q86WV5 123 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 ATOH7Q8N100 152 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 C12orf45Q8N5I9 185 aaPredicted RBP0.03□□□□□ -2.4
ATM-220ENST00000533526 PARD6GQ9BYG4 376 aaPredicted RBP0.03□□□□□ -2.4
ATM-220ENST00000533526 TMEM133Q9H2Q1 129 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 HEATR1Q9H583 2144 aaKnown RBP0.03□□□□□ -2.4
ATM-220ENST00000533526 PSTPIP2Q9H939 334 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 JPT1Q9UK76 154 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 FBXO5Q9UKT4 447 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 ARHGEF28Q8N1W1 1705 aaKnown RBP0.03□□□□□ -2.4
ATM-220ENST00000533526 MYO5AQ9Y4I1 1855 aaKnown RBP0.03□□□□□ -2.41
ATM-220ENST00000533526 MYH2Q9UKX2 1941 aa0.03□□□□□ -2.41
ATM-220ENST00000533526 CECR2Q9BXF3 1484 aa0.03□□□□□ -2.41
ATM-220ENST00000533526 MEGF8Q7Z7M0 2845 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 SIP14410 1827 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 TRAV10A0A0B4J240 114 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 A8MWV9 139 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 SRP14P37108 136 aaKnown RBP0.02□□□□□ -2.41
ATM-220ENST00000533526 FXYD6P3P58550 94 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 LYRM7Q5U5X0 104 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 Q6Q795 121 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 Q8IYB0 196 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 OR5D14Q8NGL3 314 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 YPEL2Q96QA6 119 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 TMEM138Q9NPI0 162 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 PCTPQ9UKL6 214 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 LY96Q9Y6Y9 160 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 PTPRFP10586 1907 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 MYH10P35580 1976 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 TET1Q8NFU7 2136 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 PIK3C2GO75747 1445 aa0.02□□□□□ -2.41
ATM-220ENST00000533526 FSIP2Q5CZC0 6907 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 VIRMAQ69YN4 1812 aaKnown RBP0.01□□□□□ -2.41
ATM-220ENST00000533526 DOCK4Q8N1I0 1966 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 CHD3Q12873 2000 aaKnown RBP0.01□□□□□ -2.41
ATM-220ENST00000533526 F8W1H4 67 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 COX7CP15954 63 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 RNASE4P34096 147 aaKnown RBP0.01□□□□□ -2.41
ATM-220ENST00000533526 DSCR4P56555 118 aaPredicted RBP0.01□□□□□ -2.41
ATM-220ENST00000533526 OR52L1Q8NGH7 329 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 SLC25A40Q8TBP6 338 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 TRIM4Q9C037 500 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 APCP25054 2843 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 ARHGEF11O15085 1522 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 OBSL1O75147 1896 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 TRPM7Q96QT4 1865 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 PTPRDP23468 1912 aa0.01□□□□□ -2.41
ATM-220ENST00000533526 E7EUB6 86 aa0□□□□□ -2.41
ATM-220ENST00000533526 KPNA3O00505 521 aaPredicted RBP0□□□□□ -2.41
ATM-220ENST00000533526 MGAMO43451 1857 aa0□□□□□ -2.41
ATM-220ENST00000533526 ERC2-IT1O76042 136 aa0□□□□□ -2.41
ATM-220ENST00000533526 CD2P06729 351 aa0□□□□□ -2.41
ATM-220ENST00000533526 SMIM17P0DL12 118 aa0□□□□□ -2.41
ATM-220ENST00000533526 CXCL8P10145 99 aa0□□□□□ -2.41
ATM-220ENST00000533526 KDELR1P24390 212 aa0□□□□□ -2.41
ATM-220ENST00000533526 ZNF137PP52743 207 aa0□□□□□ -2.41
ATM-220ENST00000533526 ROMO1P60602 79 aa0□□□□□ -2.41
ATM-220ENST00000533526 HIST1H3AP68431 136 aa0□□□□□ -2.41
ATM-220ENST00000533526 H3F3AP84243 136 aa0□□□□□ -2.41
ATM-220ENST00000533526 MYL5Q02045 173 aa0□□□□□ -2.41
ATM-220ENST00000533526 KRR1Q13601 381 aaKnown RBP0□□□□□ -2.41
ATM-220ENST00000533526 EDDM3AQ14507 147 aa0□□□□□ -2.41
ATM-220ENST00000533526 FMN1Q68DA7 1419 aa0□□□□□ -2.41
ATM-220ENST00000533526 C22orf39Q6P5X5 142 aa0□□□□□ -2.41
ATM-220ENST00000533526 DDI1Q8WTU0 396 aa0□□□□□ -2.41
ATM-220ENST00000533526 HSPB8Q9UJY1 196 aa0□□□□□ -2.41
ATM-220ENST00000533526 MAST4O15021 2626 aa-0□□□□□ -2.41
ATM-220ENST00000533526 UNC13CQ8NB66 2214 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 NUP98P52948 1817 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 UBR2Q8IWV8 1755 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 CTTNBP2Q8WZ74 1663 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 CELSR1Q9NYQ6 3014 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 ZFYVE9O95405 1425 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 B4DSR2 109 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 NDUFB3O43676 98 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 SPINT3P49223 89 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 SPATA45Q537H7 98 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 C6orf52Q5T4I8 152 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 TRAPPC5Q8IUR0 188 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 PDZD9Q8IXQ8 264 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 OR10K1Q8NGX5 313 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 CCDC42Q96M95 316 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 SLC25A21Q9BQT8 299 aaPredicted RBP-0.01□□□□□ -2.41
ATM-220ENST00000533526 PBOV1Q9GZY1 135 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 TMEM126AQ9H061 195 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 UCK1Q9HA47 277 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 GLTPQ9NZD2 209 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 RNF11Q9Y3C5 154 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 MUC4Q99102 2169 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 MYO18AQ92614 2054 aaKnown RBP-0.01□□□□□ -2.41
ATM-220ENST00000533526 ANKRD31Q8N7Z5 1873 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 KIF1BO60333 1816 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 COL24A1Q17RW2 1714 aa-0.01□□□□□ -2.41
ATM-220ENST00000533526 A0A087WUJ7 227 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 SMIM9A6NGZ8 99 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 C17orf112F2Z3M2 114 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 JMJD7-PLA2G4BH0Y9G9 81 aa-0.02□□□□□ -2.41
ATM-220ENST00000533526 PDE6DO43924 150 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms