RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 OR8I2Q8N0Y5 310 aa17■□□□□ 0.31
SMPD1-209ENST00000533196 C2CD4CQ8TF44 421 aa17■□□□□ 0.31
SMPD1-209ENST00000533196 RBMY1A1P0DJD3 496 aaKnown RBP16.99■□□□□ 0.31
SMPD1-209ENST00000533196 RBMY1CP0DJD4 496 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 MEOX2P50222 304 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 RBMY1FQ15415 496 aaKnown RBP16.99■□□□□ 0.31
SMPD1-209ENST00000533196 BPIFCQ8NFQ6 507 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 CLUHP3Q96NS8 147 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 CLEC5AQ9NY25 188 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 NDUFA13Q9P0J0 144 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 FLVCR2Q9UPI3 526 aa16.99■□□□□ 0.31
SMPD1-209ENST00000533196 ISLRO14498 428 aa16.98■□□□□ 0.31
SMPD1-209ENST00000533196 SOCS3O14543 225 aa16.98■□□□□ 0.31
SMPD1-209ENST00000533196 AKR1C1Q04828 323 aa16.98■□□□□ 0.31
SMPD1-209ENST00000533196 SPATA31B1PQ5VZV4 182 aa16.98■□□□□ 0.31
SMPD1-209ENST00000533196 FOXI2Q6ZQN5 318 aa16.98■□□□□ 0.31
SMPD1-209ENST00000533196 OR4D5Q8NGN0 318 aa16.98■□□□□ 0.31
SMPD1-209ENST00000533196 WDR12Q9GZL7 423 aaKnown RBP16.98■□□□□ 0.31
SMPD1-209ENST00000533196 SAV1Q9H4B6 383 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-209ENST00000533196 BTCP35070 178 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 GALR1P47211 349 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 C4orf46Q504U0 113 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 ACOT7LQ6ZUV0 252 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 TMEM144Q7Z5S9 345 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 SMIM8Q96KF7 97 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 PSENENQ9NZ42 101 aa16.97■□□□□ 0.31
SMPD1-209ENST00000533196 H3BP45 60 aa16.96■□□□□ 0.31
SMPD1-209ENST00000533196 IL7P13232 177 aa16.96■□□□□ 0.31
SMPD1-209ENST00000533196 POLR2GP62487 172 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMPD1-209ENST00000533196 LINC00052Q96N35 136 aa16.96■□□□□ 0.31
SMPD1-209ENST00000533196 GPR82Q96P67 336 aa16.96■□□□□ 0.31
SMPD1-209ENST00000533196 XCL2Q9UBD3 114 aa16.96■□□□□ 0.31
SMPD1-209ENST00000533196 LINC00854A0A1B0GVQ3 168 aa16.95■□□□□ 0.3
SMPD1-209ENST00000533196 ZNF98A6NK75 572 aa16.95■□□□□ 0.3
SMPD1-209ENST00000533196 ANXA7P20073 488 aaKnown RBP16.95■□□□□ 0.3
SMPD1-209ENST00000533196 NEU1Q99519 415 aa16.95■□□□□ 0.3
SMPD1-209ENST00000533196 ELOA3CA0A087WX78 387 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-209ENST00000533196 HLA-DMBP28068 263 aa16.94■□□□□ 0.3
SMPD1-209ENST00000533196 PAX9P55771 341 aa16.94■□□□□ 0.3
SMPD1-209ENST00000533196 MITD1Q8WV92 249 aa16.94■□□□□ 0.3
SMPD1-209ENST00000533196 TMEM147Q9BVK8 224 aa16.94■□□□□ 0.3
SMPD1-209ENST00000533196 PMS2P5A8MQ11 134 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 FNDC10F2Z333 226 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 SSSCA1O60232 199 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 TAS2R30P59541 319 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 GDF5OSQ5U4N7 250 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 OR1B1Q8NGR6 318 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 SLC25A32Q9H2D1 315 aa16.93■□□□□ 0.3
SMPD1-209ENST00000533196 TRAV10A0A0B4J240 114 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 SMIM9A6NGZ8 99 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 ORM2P19652 201 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 SELENOTP62341 195 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 DLK1P80370 383 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 IAH1Q2TAA2 248 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-209ENST00000533196 EBLN2Q6P2I7 272 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 TMEM14EPQ6UXP3 125 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 ZNF705AQ6ZN79 300 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-209ENST00000533196 SLC25A22Q9H936 323 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 RPRMQ9NS64 109 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 KMT2AQ03164 3969 aa16.92■□□□□ 0.3
SMPD1-209ENST00000533196 SMCO3A2RU48 225 aa16.91■□□□□ 0.3
SMPD1-209ENST00000533196 TSC22D2O75157 780 aa16.91■□□□□ 0.3
SMPD1-209ENST00000533196 IL5P05113 134 aa16.91■□□□□ 0.3
SMPD1-209ENST00000533196 GATA2P23769 480 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-209ENST00000533196 TMEM182Q6ZP80 229 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-209ENST00000533196 CYP2G1PQ6ZSU1 146 aa16.91■□□□□ 0.3
SMPD1-209ENST00000533196 S100A7AQ86SG5 101 aa16.91■□□□□ 0.3
SMPD1-209ENST00000533196 ZBTB8BQ8NAP8 495 aaPredicted RBP16.91■□□□□ 0.3
SMPD1-209ENST00000533196 C16orf92Q96LL3 132 aa16.91■□□□□ 0.3
SMPD1-209ENST00000533196 VPS13DQ5THJ4 4388 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 LYRM1O43325 122 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 PLP1P60201 277 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 OR10P1Q8NGE3 313 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 RSG1Q9BU20 258 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 C20orf85Q9H1P6 137 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 NPVFQ9HCQ7 196 aa16.9■□□□□ 0.3
SMPD1-209ENST00000533196 TMEM189A5PLL7 270 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 ZNF705FA8MVS1 300 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-209ENST00000533196 IGLL5B9A064 214 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 PLA2G10O15496 165 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 ZNF705DP0CH99 300 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-209ENST00000533196 ZNF705BP0CI00 300 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-209ENST00000533196 RAP2BP61225 183 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 PSG9Q00887 426 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 Q6ZTC4 211 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 OR4B1Q8NGF8 309 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 APLNQ9ULZ1 77 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 RNF24Q9Y225 148 aa16.89■□□□□ 0.29
SMPD1-209ENST00000533196 A0A0J9YX75 114 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 H3BRN7 92 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 SCGB1D2O95969 90 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 IGKV3-20P01619 116 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 DEFB1P60022 68 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 ZNF709Q8N972 641 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 SHANK2-AS3Q9BTD1 123 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 SLC25A39Q9BZJ4 359 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-209ENST00000533196 MGAT4CQ9UBM8 478 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 HIGD1AQ9Y241 93 aa16.88■□□□□ 0.29
SMPD1-209ENST00000533196 K7EPK0 472 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms