RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 C1QL4Q86Z23 238 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 OR10G4Q8NGN3 311 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 OR10G9Q8NGN4 311 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 OR10G7Q8NGN6 311 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 LRRC20Q8TCA0 184 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 UBQLN2Q9UHD9 624 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 U3KQE9 123 aa10.78□□□□□ -0.68
HIF3A-215ENST00000533145 A0A1W2PRX2 142 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 A8MWP6 167 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 COX7A2P2O60397 106 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 CRYBB3P26998 211 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 RAB2AP61019 212 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 RHOBP62745 196 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 NSUN5P1Q3KNT7 163 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 SAT2Q96F10 170 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-215ENST00000533145 MRPL32Q9BYC8 188 aaKnown RBP10.77□□□□□ -0.69
HIF3A-215ENST00000533145 ACTR3CQ9C0K3 210 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-215ENST00000533145 RABAC1Q9UI14 185 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 RNF24Q9Y225 148 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 HIGD1AQ9Y241 93 aa10.77□□□□□ -0.69
HIF3A-215ENST00000533145 NBEAL1Q6ZS30 2694 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 RGS13O14921 159 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 NPPCP23582 126 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 FAM74A1Q5RGS3 127 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 FAM78BQ5VT40 261 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 LINC00305Q7Z4B0 112 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 SPATA3Q8NHX4 192 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 MBD3L1Q8WWY6 194 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 METTL26Q96S19 204 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 SLC25A39Q9BZJ4 359 aaPredicted RBP10.76□□□□□ -0.69
HIF3A-215ENST00000533145 SEPSECSQ9HD40 501 aaKnown RBP10.76□□□□□ -0.69
HIF3A-215ENST00000533145 TECRQ9NZ01 308 aaKnown RBP10.76□□□□□ -0.69
HIF3A-215ENST00000533145 DOK5Q9P104 306 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 PFDN2Q9UHV9 154 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 FUT9Q9Y231 359 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
HIF3A-215ENST00000533145 CTXND1A0A1B0GTU2 59 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 A0A1W2PPV4 95 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 H3BRN7 92 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 C8orf88P0DMB2 117 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 CDC34P49427 236 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-215ENST00000533145 SLURP1P55000 103 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 SYNJ2BPP57105 145 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 BLOC1S1P78537 153 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 ZNF726P1Q15940 193 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 SHANK2-AS3Q9BTD1 123 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
HIF3A-215ENST00000533145 STAB1Q9NY15 2570 aa10.75□□□□□ -0.69
HIF3A-215ENST00000533145 ATRQ13535 2644 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 ZNF320A2RRD8 509 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 ZNF98A6NK75 572 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 BUB3O43684 328 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 FHITP49789 147 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 C1orf194Q5T5A4 169 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 FAM122CQ6P4D5 195 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 C3orf56Q8N813 242 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 OR4F17Q8NGA8 305 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 DLX4Q92988 240 aaPredicted RBP10.74□□□□□ -0.69
HIF3A-215ENST00000533145 RAB24Q969Q5 203 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 UHRF2Q96PU4 802 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 OR4F4Q96R69 305 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
HIF3A-215ENST00000533145 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 TRAV1-1A0A0B4J248 108 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 A0A1W2PS18 150 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 TMEM213A2RRL7 107 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 ZNF705EA8MWA4 302 aaPredicted RBP10.73□□□□□ -0.69
HIF3A-215ENST00000533145 STAG3L2P0CL84 134 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 TAS2R45P59539 299 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 TM4SF20Q53R12 229 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 MORN5Q5VZ52 161 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 MIR17HGQ75NE6 70 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 LYPD6BQ8NI32 183 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 FAM213BQ8TBF2 198 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 FAM167A-AS1Q96KT0 104 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 SMPXQ9UHP9 88 aa10.73□□□□□ -0.69
HIF3A-215ENST00000533145 H2AFB1P0C5Y9 115 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 SPATA31B1PQ5VZV4 182 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 PQLC2Q6ZP29 291 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 SSX7Q7RTT5 188 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 NARS2Q96I59 477 aaKnown RBP10.72□□□□□ -0.69
HIF3A-215ENST00000533145 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 SIGLEC8Q9NYZ4 499 aa10.72□□□□□ -0.69
HIF3A-215ENST00000533145 C2orf70A6NJV1 201 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 OVOL1O14753 267 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 ZNF207O43670 478 aaKnown RBP10.71□□□□□ -0.69
HIF3A-215ENST00000533145 APOHP02749 345 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms