RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SMPXQ9UHP9 88 aa8.53□□□□□ -1.04
TRAPPC4-211ENST00000533012 IGHV7-4-1A0A0J9YVY3 117 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 WI2-2373I1.2A0A1W2PRP0 233 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 A0A1W2PS18 150 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 DFFBO76075 338 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 IGLV1-51P01701 117 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 EDN2P20800 178 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 SELENOTP62341 195 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 CLINT1Q14677 625 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 DEFB114Q30KQ6 69 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 RNF125Q96EQ8 232 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 FBXL17Q9UF56 701 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 RABAC1Q9UI14 185 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 WDR83OSQ9Y284 106 aa8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 LSM4Q9Y4Z0 139 aaKnown RBP8.52□□□□□ -1.05
TRAPPC4-211ENST00000533012 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 UBE2L5PA0A1B0GUS4 154 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 AGPAT2O15120 278 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 MPDU1O75352 247 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 CRYBB3P26998 211 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 CAMLGP49069 296 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 EGFEM1PQ0D2K5 195 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 BEAN1Q3B7T3 259 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 TOR2AQ5JU69 321 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 LCN12Q6JVE5 192 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 BTNL8Q6UX41 500 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 TMEM182Q6ZP80 229 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 RBPMS2Q6ZRY4 209 aaKnown RBP8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 OR2K2Q8NGT1 345 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 GNPNAT1Q96EK6 184 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 RHPN1-AS1Q9BWJ2 59 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 SMIM3Q9BZL3 60 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 TMEM231Q9H6L2 316 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 MLXQ9UH92 298 aa8.51□□□□□ -1.05
TRAPPC4-211ENST00000533012 IGHV3OR16-13A0A075B7E8 117 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 IGHV3-74A0A0B4J1X5 117 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 CHEK1O14757 476 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 IFNA5P01569 189 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 APOHP02749 345 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 ORM2P19652 201 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 FGF7P21781 194 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 S100A7P31151 101 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 SULT1A2P50226 295 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 LYZP61626 148 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 USF2Q15853 346 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 CD300EQ496F6 205 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 KPRPQ5T749 579 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 SCGB1C1Q8TD33 95 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 GRAMD2BQ96HH9 432 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 MGST2Q99735 147 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 ATP5SQ99766 215 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 VSIRQ9H7M9 311 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 CYTL1Q9NRR1 136 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 SLC45A2Q9UMX9 530 aa8.5□□□□□ -1.05
TRAPPC4-211ENST00000533012 TRAV25A0A0B4J276 109 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 IGHV3-66A0A0C4DH42 116 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 ZNF705EA8MWA4 302 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 UMAD1C9J7I0 102 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 HYPMO75409 117 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 CD5P06127 495 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 LINC00869P0C866 280 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 KRTAP10-11P60412 298 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 RAB2AP61019 212 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 RPL7L1Q6DKI1 246 aaKnown RBP8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 Q6ZRG5 221 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 S100A7AQ86SG5 101 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 ZNF709Q8N972 641 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 OR1B1Q8NGR6 318 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 TMED6Q8WW62 240 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 WDR61Q9GZS3 305 aaKnown RBP8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 ZNF256Q9Y2P7 627 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 U3KQE9 123 aa8.49□□□□□ -1.05
TRAPPC4-211ENST00000533012 OR5G3P0C626 314 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 RPL29P47914 159 aaKnown RBP8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 PLP1P60201 277 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 GUCA2BQ16661 112 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 PXDC1Q5TGL8 231 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 RNF2Q99496 336 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 NPCDR1Q9BY65 106 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 ARV1Q9H2C2 271 aa8.48□□□□□ -1.05
TRAPPC4-211ENST00000533012 MGAM2Q2M2H8 2515 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 ZNF785A8K8V0 405 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 C17orf112F2Z3M2 114 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 BUB3O43684 328 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 GP9P14770 177 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PAFAH1B2P68402 229 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PRR20EP86478 221 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PRR20CP86479 221 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PRR20DP86480 221 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PRR20BP86481 221 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PRR20AP86496 221 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 FAM74A1Q5RGS3 127 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 MIC13Q5XKP0 118 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms