RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TMEM238LA0A1B0GVL6 79 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 OR4C46A6NHA9 309 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 KRASP01116 189 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 GSTP1P09211 210 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 PI3P19957 117 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 PRR3P79522 188 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 IFITM3Q01628 133 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 ANKRD55Q3KP44 614 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 CDNFQ49AH0 187 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SLC35G3Q8N808 338 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 OR4S2Q8NH73 311 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 NPIPB3Q92617 1050 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TUBA4BQ9H853 241 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 JPT2Q9H910 190 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SCPEP1Q9HB40 452 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SLC45A2Q9UMX9 530 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 A0A1W2PNN7 141 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SMIM30A4D0T7 59 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TNFSF12O43508 249 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 M6PRP20645 277 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 FCGR2CP31995 323 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 ETV6P41212 452 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 MRPS15P82914 257 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 RSU1Q15404 277 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 PSMG4Q5JS54 123 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 Q6AWC8 147 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 HSD17B13Q7Z5P4 300 aaPredicted RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 TMED4Q7Z7H5 227 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 NIT1Q86X76 327 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 ZNF664Q8N3J9 261 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 LGALS14Q8TCE9 139 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TMEM203Q969S6 136 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 ADTRPQ96IZ2 230 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SLC25A39Q9BZJ4 359 aaPredicted RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 CACYBPQ9HB71 228 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 AQP4P55087 323 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 RPS16P62249 146 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 SP6Q3SY56 376 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 PRSS48Q7RTY5 328 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 EEF1AKMT3Q96AZ1 226 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TMEM222Q9H0R3 208 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 RHBDL2Q9NX52 303 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 STEAP1Q9UHE8 339 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 UFC1Q9Y3C8 167 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TRBV20OR9-2A0A075B6H5 130 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 EIF4EP06730 217 aaKnown RBP0.94□□□□□ -2.26
KNL1-211ENST00000533001 TRAPPC2P0DI81 140 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TRAPPC2BP0DI82 140 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 RRASP10301 218 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 FLOT2Q14254 428 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 LCE1AQ5T7P2 110 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 C9orf47Q6ZRZ4 202 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SLC25A29Q8N8R3 303 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 HIST1H2AAQ96QV6 131 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 SHANK2-AS3Q9BTD1 123 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 MED4Q9NPJ6 270 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 MTFP1Q9UDX5 166 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 VAX2Q9UIW0 290 aa0.94□□□□□ -2.26
KNL1-211ENST00000533001 TRBV7-9A0A0J9YWB2 115 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 CRYM-AS1A6NIL9 109 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 BET1O15155 118 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 GSTA4O15217 222 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 SHOXO15266 292 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 RLN1P04808 185 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 SFTA3P0C7M3 94 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 HIST1H1BP16401 226 aaKnown RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 ZNF266Q14584 549 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 RRM2BQ7LG56 351 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 MS4A15Q8N5U1 240 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 TMEM75Q8N9X5 138 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 SLC24A4Q8NFF2 622 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 RAB3CQ96E17 227 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 TRGV9Q99603 122 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 MLST8Q9BVC4 326 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 RAB22AQ9UL26 194 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 V9GY05 133 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 PHOX2AO14813 284 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 MT3P25713 68 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 TAS2R60P59551 318 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 GUCA2BQ16661 112 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 AWAT2Q6E213 333 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 OR8G2PQ6IF36 304 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 FXYD5Q96DB9 178 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 IGKV3-7A0A075B6H7 116 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 IGHV3-16A0A0C4DH30 117 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 NOTOA8MTQ0 251 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 HOXB6P17509 224 aaKnown RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 EMP1P54849 157 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 TAS2R20P59543 309 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 GCSAMLQ5JQS6 135 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 DNLZQ5SXM8 178 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 HES5Q5TA89 166 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 FAAP20Q6NZ36 180 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 TBC1D26Q86UD7 250 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 CCDC28AQ8IWP9 274 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 SELENOHQ8IZQ5 122 aaKnown RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 GSN-AS1Q9NRJ2 163 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 V9GYH0 126 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 HELTA6NFD8 242 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms