RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 FOXL1Q12952 345 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 MPV17L2Q567V2 206 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 RNASE7Q9H1E1 156 aaKnown RBP6.73□□□□□ -1.33
CTNND1-234ENST00000532844 OSTCQ9NRP0 149 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 CRIM1Q9NZV1 1036 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 GAGE7O76087 117 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-234ENST00000532844 CCL20P78556 96 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 IGHV1-18A0A0C4DH31 117 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 TMEM8BA6NDV4 472 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 CLEC19AQ6UXS0 136 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 TMEM105Q8N8V8 129 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 RASL10AQ92737 203 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 TET1Q8NFU7 2136 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 ZFP36L1Q07352 338 aaKnown RBP6.73□□□□□ -1.33
CTNND1-234ENST00000532844 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.331e-6■■□□□ 13.9
CTNND1-234ENST00000532844 RASL11AQ6T310 242 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 ZIC4Q8N9L1 334 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 VSIRQ9H7M9 311 aa6.73□□□□□ -1.33
CTNND1-234ENST00000532844 SCN5AQ14524 2016 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 IGKV1-12A0A0C4DH73 117 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 NPIPB5A8MRT5 1133 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
CTNND1-234ENST00000532844 IGKV1D-12P01611 117 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 UTF1Q5T230 341 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 COLCA1Q6ZS62 124 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 TMEM144Q7Z5S9 345 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 TSSC4Q9Y5U2 329 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-234ENST00000532844 NABP1Q96AH0 204 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 OTORQ9NRC9 128 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 A0A087X0K7 114 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 CD7P09564 240 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 PPDPFLQ8WWR9 84 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 CHCHD5Q9BSY4 110 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 CLPSL1A2RUU4 121 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 AMBPP02760 352 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 EVI2AP22794 236 aa6.72□□□□□ -1.33
CTNND1-234ENST00000532844 HAMPP81172 84 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 LAGE3Q14657 143 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 GGNQ86UU5 652 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 IGKV1-27A0A075B6S5 117 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 MYOD1P15172 320 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 ID3Q02535 119 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 SNHG12Q9BXW3 62 aa6.71□□□□□ -1.33
CTNND1-234ENST00000532844 TMEM167AQ8TBQ9 72 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 KLHDC3Q9BQ90 382 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 GBF1Q92538 1859 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 NBR2O15453 112 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 CD5P06127 495 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 SELLP14151 372 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 REG4Q9BYZ8 158 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 SPTBP11277 2137 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 FCN3O75636 299 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 FAM90A2PQ658T7 463 aa6.71□□□□□ -1.34
CTNND1-234ENST00000532844 NTN3O00634 580 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-234ENST00000532844 PYYP10082 97 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 CDKN1AP38936 164 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 ACTL10Q5JWF8 245 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 TRPM7Q96QT4 1865 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 F2Z2F3 143 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 BMPERQ8N8U9 685 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 CYTL1Q9NRR1 136 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 IGHV3-11P01762 117 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 FOXG1P55316 489 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-234ENST00000532844 HEPN1Q6WQI6 88 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 C1QL4Q86Z23 238 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 ZCCHC24Q8N2G6 241 aaKnown RBP6.7□□□□□ -1.34
CTNND1-234ENST00000532844 TMEM133Q9H2Q1 129 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 LHFPL1Q86WI0 220 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 PRADC1Q9BSG0 188 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 PNRC2Q9NPJ4 139 aaKnown RBP6.7□□□□□ -1.34
CTNND1-234ENST00000532844 FAM90A9PA6NNJ1 464 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 SUPT4H1P63272 117 aaKnown RBP6.7□□□□□ -1.34
CTNND1-234ENST00000532844 PRCDQ00LT1 54 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 EFNB3Q15768 340 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 ANKRD29Q8N6D5 301 aa6.7□□□□□ -1.34
CTNND1-234ENST00000532844 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 A0A087WX48 190 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 C5orf63A6NC05 138 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
CTNND1-234ENST00000532844 TSKUQ8WUA8 353 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 RNASE6Q93091 150 aaKnown RBP6.69□□□□□ -1.34
CTNND1-234ENST00000532844 IGHV1-46P01743 117 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 CD24P25063 80 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 FOXF2Q12947 444 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 PVRIGQ6DKI7 326 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 SCRT1Q9BWW7 348 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 SS18L2Q9UHA2 77 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 PLXNA3P51805 1871 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 TRGV11A0A075B6L2 103 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 TRBV24-1A0A075B6N3 115 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms