RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ALPK3Q96L96 1907 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 TCRAP04437 139 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 ASIPP42127 132 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 KLF17Q5JT82 389 aaPredicted RBP12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 TMEM190Q8WZ59 177 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 OR1N2Q8NGR9 330 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 C18orf15Q96N68 181 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 NDUFAF3Q9BU61 184 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 A0A1W2PPI3 338 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 C7orf71A4D174 169 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 M0R3E3 92 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 PSMB2P49721 201 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 KIR2DL4Q99706 377 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
PCDHA3-202ENST00000532566 TRAV40A0A0B4J280 105 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 EXOC3-AS1Q8N2X6 119 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 PCNX3Q9H6A9 2034 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 RPL13AP40429 203 aaKnown RBP12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 GCSHP23434 173 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 ZNF726P1Q15940 193 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 HAPLN4Q86UW8 402 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 KIR3DL3Q8N743 410 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 DUX5Q96PT3 197 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 PMCHL2Q9BQD1 86 aa12.44□□□□□ -0.42
PCDHA3-202ENST00000532566 DENND4AQ7Z401 1863 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 TMEM131Q92545 1883 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 PRTN3P24158 256 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 ZNF56Q15929 161 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 TEX36Q5VZQ5 186 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 OR5AN1Q8NGI8 311 aa12.43□□□□□ -0.42
PCDHA3-202ENST00000532566 ZNF134P52741 427 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 SPRY4Q9C004 299 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 IGFL2Q6UWQ7 119 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 LINC00614P0C842 121 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 MIEN1Q9BRT3 115 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 NDUFA4L2Q9NRX3 87 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 FAM208BQ5VWN6 2430 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 TMEM238LA0A1B0GVL6 79 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 A6NJY4 79 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 PPP1R17O96001 155 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 PYY3Q5JQD4 70 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 ZNF833PQ6ZTB9 187 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 C11orf53Q8IXP5 236 aa12.42□□□□□ -0.42
PCDHA3-202ENST00000532566 SPG11Q96JI7 2443 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 ANKHD1Q8IWZ3 2542 aaKnown RBP12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 GAGE10A6NGK3 116 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 ATP5LO75964 103 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 LOXP28300 417 aaPredicted RBP12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 BEND2Q8NDZ0 799 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 MOB4Q9Y3A3 225 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 SAMD13Q5VXD3 122 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 CEACAM4O75871 244 aa12.41□□□□□ -0.42
PCDHA3-202ENST00000532566 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 PAX8Q06710 450 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 RASL11AQ6T310 242 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 TMEM256Q8N2U0 113 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 ACACBO00763 2458 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 MMP23AO75900 390 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 SMAGPQ0VAQ4 97 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 SNCGO76070 127 aa12.4□□□□□ -0.42
PCDHA3-202ENST00000532566 K7ERU9 68 aa12.4□□□□□ -0.43
PCDHA3-202ENST00000532566 NPIPB5A8MRT5 1133 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 RPL15P61313 204 aaKnown RBP12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 CYB5R2Q6BCY4 276 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 ST6GALNAC6Q969X2 333 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 HIST1H4GQ99525 98 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 OR11H12B2RN74 326 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 GZMBP10144 247 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 LINC00311Q8N616 119 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 OR11H1Q8NG94 326 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 OR11H2Q8NH07 326 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 TMEM160Q9NX00 188 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 A0A1W2PNU3 283 aaPredicted RBP12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 FABP2P12104 132 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 GNLYP22749 145 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 NIT1Q86X76 327 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
PCDHA3-202ENST00000532566 PPBPP02775 128 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 RAB37Q96AX2 223 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 TRAV8-1A0A0A6YYK1 113 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 HAX1O00165 279 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 PAX1P15863 534 aa12.38□□□□□ -0.43
PCDHA3-202ENST00000532566 OTOGLQ3ZCN5 2332 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms