RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	KIR2DL5B	A0A0G2JN68	375 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	KIR2DL5B	A0A0G2JPC4	375 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	KNCN	A6PVL3	124 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	GOSR2	O14653	212 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	CAV2	P51636	162 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	DEFB135	Q30KP9	77 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	KIR2DL5A	Q8N109	375 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	BPIFC	Q8NFQ6	507 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	KIR2DL5B	Q8NHK3	375 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	PPP1R14B	Q96C90	147 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	NRN1	Q9NPD7	142 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	DOK5	Q9P104	306 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	RYR3	Q15413	4870 aa		12.82	□□□□□ -0.36
CTSB-223	ENST00000532370	CST7	O76096	145 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	CFD	P00746	253 aa	Predicted RBP	12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	PSMG4	Q5JS54	123 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	OR1B1	Q8NGR6	318 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	CSTL1	Q9H114	145 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	NPVF	Q9HCQ7	196 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	MGAT4C	Q9UBM8	478 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	PFDN2	Q9UHV9	154 aa		12.81	□□□□□ -0.36
CTSB-223	ENST00000532370	UBE2C	O00762	179 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	SPRY2	O43597	315 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	DEDD	O75618	318 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	NUP62	P37198	522 aa	Predicted RBP	12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	SLC38A11	Q08AI6	406 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	C1orf194	Q5T5A4	169 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370		Q6ZWC4	215 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	TMEM217	Q8N7C4	229 aa		12.8	□□□□□ -0.36
CTSB-223	ENST00000532370	IGSF23	A1L1A6	192 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	ZNF98	A6NK75	572 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	FNDC10	F2Z333	226 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	C3orf84	H3BNL1	204 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	ACTL10	Q5JWF8	245 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	TEPP	Q6URK8	271 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	OR8I2	Q8N0Y5	310 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	GGACT	Q9BVM4	153 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	SLC25A22	Q9H936	323 aa		12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	LYRM2	Q9NU23	88 aa	Predicted RBP	12.79	□□□□□ -0.36
CTSB-223	ENST00000532370	LINC00869	P0C866	280 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	LYL1	P12980	280 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	PVALB	P20472	110 aa	Predicted RBP	12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	H2BFS	P57053	126 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	ZFAND6	Q6FIF0	208 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	STH	Q8IWL8	128 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	TMEM252	Q8N6L7	170 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	RNF183	Q96D59	192 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	C17orf77	Q96MU5	243 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	TMEM147	Q9BVK8	224 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	SCRT1	Q9BWW7	348 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	SLC25A32	Q9H2D1	315 aa		12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.78	□□□□□ -0.36
CTSB-223	ENST00000532370	HYPM	O75409	117 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	DEFB1	P60022	68 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	SNRPD3	P62318	126 aa	Known RBP	12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	LRRC37A5P	Q49AS3	106 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	CASC10	Q5T4H9	136 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	TRPT1	Q86TN4	253 aa	Known RBP	12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	MGST2	Q99735	147 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	FBXL17	Q9UF56	701 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	SLC45A2	Q9UMX9	530 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	TP53TG1	Q9Y2A0	90 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370	ALG5	Q9Y673	324 aa		12.77	□□□□□ -0.37
CTSB-223	ENST00000532370		H0YIZ8	118 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	SOCS3	O14543	225 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	AGPAT2	O15120	278 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	SSNA1	O43805	119 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	CA1	P00915	261 aa	Predicted RBP	12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	GIG44	P09565	113 aa	Predicted RBP	12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	SULT1A1	P50225	295 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	PLP1	P60201	277 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	SELENOT	P62341	195 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	PATE2	Q6UY27	113 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	LINC00052	Q96N35	136 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	UHRF2	Q96PU4	802 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	RSG1	Q9BU20	258 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	NMES1	Q9C002	83 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	ARL6	Q9H0F7	186 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	OR5AC2	Q9NZP5	309 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	HIGD1A	Q9Y241	93 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370	SACS	Q9NZJ4	4579 aa		12.76	□□□□□ -0.37
CTSB-223	ENST00000532370		H3BRN7	92 aa		12.75	□□□□□ -0.37
CTSB-223	ENST00000532370	OR5G3	P0C626	314 aa		12.75	□□□□□ -0.37
CTSB-223	ENST00000532370	SHANK2-AS3	Q9BTD1	123 aa		12.75	□□□□□ -0.37
CTSB-223	ENST00000532370	SEPSECS	Q9HD40	501 aa	Known RBP	12.75	□□□□□ -0.37
CTSB-223	ENST00000532370		A0A0J9YWU9	116 aa		12.74	□□□□□ -0.37
CTSB-223	ENST00000532370	GALR1	P47211	349 aa		12.74	□□□□□ -0.37
CTSB-223	ENST00000532370	RAP2B	P61225	183 aa		12.74	□□□□□ -0.37
CTSB-223	ENST00000532370	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
CTSB-223	ENST00000532370	UQCC1	Q9NVA1	299 aa		12.74	□□□□□ -0.37
CTSB-223	ENST00000532370	PLEC	Q15149	4684 aa	Known RBP	12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	C4BPB	P20851	252 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	S100A11	P31949	105 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	NHLH2	Q02577	135 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	VWC2	Q2TAL6	325 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	GDF5OS	Q5U4N7	250 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	ZNF546	Q86UE3	836 aa		12.73	□□□□□ -0.37
CTSB-223	ENST00000532370	STX12	Q86Y82	276 aa		12.73	□□□□□ -0.37

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