RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CNPY1Q3B7I2 92 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM128Q5BJH2 165 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 SPINK9Q5DT21 86 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 DEFB121Q5J5C9 76 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 UQCC3Q6UW78 93 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 LINC00299Q6ZSB3 139 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 LGI3Q8N145 548 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 INO80EQ8NBZ0 244 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR1P1Q8NH06 330 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 IL17DQ8TAD2 202 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF502Q8TBZ5 544 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 GPR146Q96CH1 333 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 SDHCQ99643 169 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZC4H2Q9NQZ6 224 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 CACNG5Q9UF02 275 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 SHPKQ9UHJ6 478 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF256Q9Y2P7 627 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 PLXNB1O43157 2135 aa4.39□□□□□ -1.71
HMGB1P42-201ENST00000532126 NOTCH1P46531 2555 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 IGHV3-21A0A0B4J1V1 117 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 INS-IGF2F8WCM5 200 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 NDUFB6O95139 128 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SFT2D2O95562 160 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 MT-CO2P00403 227 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 NHLRC4P0CG21 123 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SULT1A3P0DMM9 295 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SULT1A4P0DMN0 295 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SPNP16150 400 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 S100A1P23297 94 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SPCS3P61009 180 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 PPP1R1AQ13522 171 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 FAM106AQ4KMX7 169 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 Q56UQ5 140 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 PLET1Q6UQ28 207 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 IL34Q6ZMJ4 242 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 LYZL2Q7Z4W2 148 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 GPHB5Q86YW7 130 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 UBAC2Q8NBM4 344 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR52E5Q8NH55 327 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 C7orf50Q9BRJ6 194 aaKnown RBP4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 NIPSNAP3BQ9BS92 247 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 MLST8Q9BVC4 326 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 SAV1Q9H4B6 383 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 CACFD1Q9UGQ2 172 aa4.38□□□□□ -1.71
HMGB1P42-201ENST00000532126 A0A087WZ39 114 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 IGHV3-35A0A0C4DH35 117 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 A0A1B0GU03 582 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 DUXBA0A1W2PPF3 345 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR2T8A6NH00 312 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 C2orf70A6NJV1 201 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 CEBPZOSA8MTT3 80 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 I3L2K1 104 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 K7EIM0 57 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 LGALS9O00182 355 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 CORTO00230 105 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 PLA2G10O15496 165 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 NUPL2O15504 423 aaKnown RBP4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 TGOLN2O43493 480 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 HSBP1O75506 76 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 IGLV1-51P01701 117 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 FOLR2P14207 255 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 UBE2MP61081 183 aaKnown RBP4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 SMCO1Q147U7 214 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF124Q15973 351 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 NMSQ5H8A3 153 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR1S1Q8NH92 325 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 DYNLRB2Q8TF09 96 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 S100ZQ8WXG8 99 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 CACNG8Q8WXS5 425 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 CCDC32Q9BV29 185 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 HIPK2Q9H2X6 1198 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 SIGLEC8Q9NYZ4 499 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 UFC1Q9Y3C8 167 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 SELENOKQ9Y6D0 94 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 NOTCH3Q9UM47 2321 aa4.37□□□□□ -1.71
HMGB1P42-201ENST00000532126 TNCP24821 2201 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 A8MWP6 167 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 LYRM1O43325 122 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 GNG7O60262 68 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 IGHV3-48P01763 117 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 CTSGP08311 255 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR4E1P0C645 316 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 RNASE2P10153 161 aaKnown RBP4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 CBLN1P23435 193 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 BTCP35070 178 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 OPRK1P41145 380 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 TNFRSF9Q07011 255 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 FOXI1Q12951 378 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF846Q147U1 533 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms