RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
PKP3-208ENST00000531857 ZNF414Q96IQ9 312 aa12.71□□□□□ -0.37
PKP3-208ENST00000531857 RNF2Q99496 336 aa12.71□□□□□ -0.37
PKP3-208ENST00000531857 RARRES2Q99969 163 aa12.71□□□□□ -0.37
PKP3-208ENST00000531857 GINS3Q9BRX5 216 aa12.71□□□□□ -0.37
PKP3-208ENST00000531857 CSTL1Q9H114 145 aa12.71□□□□□ -0.37
PKP3-208ENST00000531857 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 UMAD1C9J7I0 102 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 KRBOX1C9JBD0 128 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 K7EMT4 169 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 SSSCA1O60232 199 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 SULT1A1P50225 295 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 ATP6V1FQ16864 119 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 SPSB3Q6PJ21 355 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
PKP3-208ENST00000531857 STRAPQ9Y3F4 350 aaKnown RBP12.7□□□□□ -0.38
PKP3-208ENST00000531857 VPS13DQ5THJ4 4388 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 DEFB4AO15263 64 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 TFPI2P48307 235 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 SULT1A2P50226 295 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 ATP5IP56385 69 aaPredicted RBP12.69□□□□□ -0.38
PKP3-208ENST00000531857 RPL7L1Q6DKI1 246 aaKnown RBP12.69□□□□□ -0.38
PKP3-208ENST00000531857 OR1S2Q8NGQ3 325 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 GATAD1Q8WUU5 269 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 PARD6GQ9BYG4 376 aaPredicted RBP12.69□□□□□ -0.38
PKP3-208ENST00000531857 SMPXQ9UHP9 88 aa12.69□□□□□ -0.38
PKP3-208ENST00000531857 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
PKP3-208ENST00000531857 C15orf62A8K5M9 175 aa12.68□□□□□ -0.38
PKP3-208ENST00000531857 K7EIM0 57 aa12.68□□□□□ -0.38
PKP3-208ENST00000531857 CYB5BO43169 146 aa12.68□□□□□ -0.38
PKP3-208ENST00000531857 IFNA5P01569 189 aa12.68□□□□□ -0.38
PKP3-208ENST00000531857 FGF2P09038 288 aa12.68□□□□□ -0.38
PKP3-208ENST00000531857 C11orf68Q9H3H3 251 aaKnown RBP12.68□□□□□ -0.38
PKP3-208ENST00000531857 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
PKP3-208ENST00000531857 IGKV3-7A0A075B6H7 116 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 MARCH11A6NNE9 402 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 CHEK1O14757 476 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 KRASP01116 189 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 IFNA4P05014 189 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 CTSGP08311 255 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 Q56UQ5 140 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 DPPA3Q6W0C5 159 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 OR1L8Q8NGR8 309 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 HINT2Q9BX68 163 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 NDUFA4L2Q9NRX3 87 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 FKBP11Q9NYL4 201 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 PSENENQ9NZ42 101 aa12.67□□□□□ -0.38
PKP3-208ENST00000531857 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 FAM24AA6NFZ4 105 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 SPP1P10451 314 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 SPCS3P61009 180 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 GBGT1Q8N5D6 347 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 OR4A16Q8NH70 328 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 C2CD4CQ8TF44 421 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 TMED6Q8WW62 240 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 PINX1Q96BK5 328 aaKnown RBP12.66□□□□□ -0.38
PKP3-208ENST00000531857 ATP6V0BQ99437 205 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 ATP5SQ99766 215 aa12.66□□□□□ -0.38
PKP3-208ENST00000531857 AGRNO00468 2067 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 A0A0G2JRQ6 117 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 G6PCP35575 357 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 PAX9P55771 341 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 Q6ZRM9 215 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 TMEM116Q8NCL8 245 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
PKP3-208ENST00000531857 DNAH6Q9C0G6 4158 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 IGSF23A1L1A6 192 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
PKP3-208ENST00000531857 NHLH2Q02577 135 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 FAM90A2PQ658T7 463 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 OR5C1Q8NGR4 320 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 OR51B2Q9Y5P1 312 aa12.64□□□□□ -0.39
PKP3-208ENST00000531857 IGLL5B9A064 214 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 YIF1AO95070 293 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 CA1P00915 261 aaPredicted RBP12.63□□□□□ -0.39
PKP3-208ENST00000531857 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
PKP3-208ENST00000531857 RAB2AP61019 212 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 TMEM14EPQ6UXP3 125 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 PSMG3Q9BT73 122 aaPredicted RBP12.63□□□□□ -0.39
PKP3-208ENST00000531857 GGACTQ9BVM4 153 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 PRNDQ9UKY0 176 aa12.63□□□□□ -0.39
PKP3-208ENST00000531857 TCTAP57738 103 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 SERF2P84101 59 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 LYPD6BQ8NI32 183 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 DTD1Q8TEA8 209 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 RBKSQ9H477 322 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 TIMM9Q9Y5J7 89 aa12.62□□□□□ -0.39
PKP3-208ENST00000531857 CEBPZOSA8MTT3 80 aa12.61□□□□□ -0.39
PKP3-208ENST00000531857 NUPL2O15504 423 aaKnown RBP12.61□□□□□ -0.39
PKP3-208ENST00000531857 TMEM50AO95807 157 aa12.61□□□□□ -0.39
PKP3-208ENST00000531857 IGHV3-48P01763 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms