RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, human

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA2-204	ENST00000530893		Q6ZWC4	215 aa		13.64	□□□□□ -0.23
BRCA2-204	ENST00000530893	S100A7A	Q86SG5	101 aa		13.64	□□□□□ -0.23
BRCA2-204	ENST00000530893	SIGLECL1	Q8N7X8	197 aa		13.64	□□□□□ -0.23
BRCA2-204	ENST00000530893	HILPDA	Q9Y5L2	63 aa		13.64	□□□□□ -0.23
BRCA2-204	ENST00000530893	SPTA1	P02549	2419 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	TRAV30	A0A087WSZ9	112 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF253	O75346	499 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	GPX1	P07203	203 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	C5orf64	Q2M2E5	130 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	KCNS1	Q96KK3	526 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	HSPB9	Q9BQS6	159 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	PRSS22	Q9GZN4	317 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	KIR2DL5B	A0A0G2JN68	375 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	KIR2DL5B	A0A0G2JPC4	375 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	SNRPC	P09234	159 aa	Known RBP	13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	SRI	P30626	198 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	LEMD1	Q68G75	181 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	KIR2DL5A	Q8N109	375 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF48	Q96MX3	618 aa	Predicted RBP	13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	NEU1	Q99519	415 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	SHANK2-AS3	Q9BTD1	123 aa		13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	RPP21	Q9H633	154 aa	Known RBP	13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	SOX21	Q9Y651	276 aa	Predicted RBP	13.63	□□□□□ -0.23
BRCA2-204	ENST00000530893	TRBV6-1	A0A0K0K1D8	114 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	NPIPB5	A8MRT5	1133 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	HIGD1C	A8MV81	97 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893		A8MWL6	223 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893		F2Z2F3	143 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	UNQ6494/PRO21346	Q6UXR6	183 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	BPIFA4P	Q86YQ2	179 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	LYPD1	Q8N2G4	141 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	GFRA4	Q9GZZ7	299 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF586	Q9NXT0	402 aa		13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	TPR	P12270	2363 aa	Known RBP	13.62	□□□□□ -0.23
BRCA2-204	ENST00000530893	ABCA4	P78363	2273 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	C19orf71	A6NCJ1	209 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	FAM231B	A6NCW3	169 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	KIAA1644	Q3SXP7	199 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	MINOS1	Q5TGZ0	78 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF562	Q6V9R5	426 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	LHFPL4	Q7Z7J7	247 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	TBX15	Q96SF7	602 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	RPH3AL	Q9UNE2	315 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	MINOS1-NBL1	R4GNA1	71 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893		H3BRN7	92 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	OR2J3	O76001	311 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF705D	P0CH99	300 aa	Predicted RBP	13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF705B	P0CI00	300 aa	Predicted RBP	13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893	SLA	Q13239	276 aa		13.61	□□□□□ -0.23
BRCA2-204	ENST00000530893		P01737	135 aa		13.6	□□□□□ -0.23
BRCA2-204	ENST00000530893	HOXB4	P17483	251 aa	Predicted RBP	13.6	□□□□□ -0.23
BRCA2-204	ENST00000530893	KLRD1	Q13241	179 aa		13.6	□□□□□ -0.23
BRCA2-204	ENST00000530893	HES1	Q14469	280 aa		13.6	□□□□□ -0.23
BRCA2-204	ENST00000530893	TEX43	Q6ZNM6	134 aa		13.6	□□□□□ -0.23
BRCA2-204	ENST00000530893	OR4F17	Q8NGA8	305 aa		13.6	□□□□□ -0.23
BRCA2-204	ENST00000530893		A0A1B0GXF2	115 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893		A0A1W2PS18	150 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	EBI3	Q14213	229 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	ZNF491	Q8N8L2	437 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	DAZAP1	Q96EP5	407 aa	Known RBP	13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	RNF125	Q96EQ8	232 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	IGLV11-55	A0A075B6I3	123 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	TRBV19	A0A075B6N1	114 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	KLF5	Q13887	457 aa	Predicted RBP	13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	TOMM20L	Q6UXN7	152 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	VMO1	Q7Z5L0	202 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893		Q86TA4	180 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	TTC9C	Q8N5M4	171 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	ARPC1A	Q92747	370 aa		13.59	□□□□□ -0.23
BRCA2-204	ENST00000530893	NPIPB6	E9PJ23	425 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	ZNF324	O75467	553 aa	Predicted RBP	13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	SFTPC	P11686	197 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	AMT	P48728	403 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	MFAP4	P55083	255 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893		Q8N6K4	173 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	OR4B1	Q8NGF8	309 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	C18orf32	Q8TCD1	76 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	SGK494	Q96LW2	274 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	C2orf88	Q9BSF0	95 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	THYN1	Q9P016	225 aa		13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	TBL2	Q9Y4P3	447 aa	Known RBP	13.58	□□□□□ -0.24
BRCA2-204	ENST00000530893	GNG7	O60262	68 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	IGLC2	P0DOY2	106 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	HBB	P68871	147 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	RCHY1	Q96PM5	261 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	FAM103A1	Q9BTL3	118 aa	Known RBP	13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893		H3BTX0	84 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893		K7EQM0	130 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	ASPHD1	Q5U4P2	390 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	TMEM75	Q8N9X5	138 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	IGFBPL1	Q8WX77	278 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	C20orf144	Q9BQM9	153 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	NRN1	Q9NPD7	142 aa		13.57	□□□□□ -0.24
BRCA2-204	ENST00000530893	PIEZO1	Q92508	2521 aa		13.56	□□□□□ -0.24
BRCA2-204	ENST00000530893	IGLV2-11	P01706	119 aa		13.56	□□□□□ -0.24
BRCA2-204	ENST00000530893	IL4	P05112	153 aa		13.56	□□□□□ -0.24
BRCA2-204	ENST00000530893	PDE6H	Q13956	83 aa		13.56	□□□□□ -0.24

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