RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 WI2-2373I1.2A0A1W2PRP0 233 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 SLC25A5P05141 298 aaKnown RBP6.54□□□□□ -1.36
CSDE1-214ENST00000530886 PATE4P0C8F1 98 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 LINC00322Q6ZN03 302 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-214ENST00000530886 EPDR1Q9UM22 224 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 F11RQ9Y624 299 aaKnown RBP6.54□□□□□ -1.36
CSDE1-214ENST00000530886 IGKV1OR2-108A0A075B7D4 117 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 IGHV3-15A0A0B4J1V0 119 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 WIPF1O43516 503 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 FSTL3O95633 263 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 FOXF2Q12947 444 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 C1orf61Q13536 156 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 OR1C1Q15619 314 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 MOB3BQ86TA1 216 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 TEN1Q86WV5 123 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 DSCAML1Q8TD84 2053 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 NGFP01138 241 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 ACP1P24666 158 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 ERVK-16P61578 105 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 RIGQ13278 110 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 FXYD5Q96DB9 178 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 CARD19Q96LW7 228 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 KLF13Q9Y2Y9 288 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-214ENST00000530886 PRRG2O14669 202 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF688P0C7X2 276 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 ASIPP42127 132 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 B3GALT5-AS1P59052 145 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 HSPE1P61604 102 aaKnown RBP6.53□□□□□ -1.36
CSDE1-214ENST00000530886 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 FAM53AQ6NSI3 398 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-214ENST00000530886 DLX4Q92988 240 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 WDR87Q6ZQQ6 2873 aa6.53□□□□□ -1.36
CSDE1-214ENST00000530886 A0A1B0GUT8 65 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 ZNF137PP52743 207 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 CITED2Q99967 270 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-214ENST00000530886 PAXXQ9BUH6 204 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 FAM234AQ9H0X4 552 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 TRAV5A0A0B4J249 113 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 ZNF503-AS2A6NEH8 195 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-214ENST00000530886 KLF17Q5JT82 389 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-214ENST00000530886 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 RPS19BP1Q86WX3 136 aaKnown RBP6.52□□□□□ -1.37
CSDE1-214ENST00000530886 MAP1LC3AQ9H492 121 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 DCHS1Q96JQ0 3298 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 FREM1Q5H8C1 2179 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 PROP1O75360 226 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 MOSP00540 346 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 CSN3P07498 182 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 C2orf83Q53S99 150 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 OR1L4Q8NGR5 311 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 UBALD1Q8TB05 177 aa6.52□□□□□ -1.37
CSDE1-214ENST00000530886 ASXL3Q9C0F0 2248 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 A0A0J9YW62 118 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 FAM90A27PA6NNH2 459 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 ZFAND5O76080 213 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 LY6DQ14210 128 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 C3AR1Q16581 482 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 POU2AF1Q16633 256 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-214ENST00000530886 AAED1Q7RTV5 226 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 PRNDQ9UKY0 176 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 FCN3O75636 299 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 IGHG3P01860 377 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 FAM106CPP0CH98 169 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 CFHR2P36980 270 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 LOXL1Q08397 574 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-214ENST00000530886 FAM106AQ4KMX7 169 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 GGNQ86UU5 652 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 GLMPQ8WWB7 406 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 NRGNQ92686 78 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 TRAV3A0A0B4J244 114 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 FCGR3BO75015 233 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 LIFP15018 202 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-214ENST00000530886 MORN5Q5VZ52 161 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 OR1L8Q8NGR8 309 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 PPP1R35Q8TAP8 253 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 PRR7Q8TB68 274 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
CSDE1-214ENST00000530886 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
CSDE1-214ENST00000530886 COL27A1Q8IZC6 1860 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-214ENST00000530886 ZNF785A8K8V0 405 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 IFITM1P13164 125 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 ID1P41134 155 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 UBE2D3P61077 147 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 UBE2D2P62837 147 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 PLP2Q04941 152 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 ZNF766Q5HY98 468 aa6.5□□□□□ -1.37
CSDE1-214ENST00000530886 WDR86Q86TI4 376 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms