RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 C9orf66Q5T8R8 295 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 C8orf86Q6ZUL3 223 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 REC114Q7Z4M0 266 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 KCNRGQ8N5I3 272 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 THAP8Q8NA92 274 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 OR9G4Q8NGQ1 327 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 OR1B1Q8NGR6 318 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 OR2K2Q8NGT1 345 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 STOML3Q8TAV4 291 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 RBMXL1Q96E39 390 aaKnown RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 RNF125Q96EQ8 232 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 RCC1LQ96I51 464 aaKnown RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 ST6GAL2Q96JF0 529 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 CCDC140Q96MF4 163 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 PSMG3Q9BT73 122 aaPredicted RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 PBDC1Q9BVG4 233 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 NPCDR1Q9BY65 106 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 SMIM3Q9BZL3 60 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 WDR61Q9GZS3 305 aaKnown RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 AURKAIP1Q9NWT8 199 aaPredicted RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 TECRQ9NZ01 308 aaKnown RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 HIGD1AQ9Y241 93 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 WDR83OSQ9Y284 106 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 PUS1Q9Y606 427 aaKnown RBP eCLIP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
SSBP3-213ENST00000530618 KMT2AQ03164 3969 aa3.69□□□□□ -1.82
SSBP3-213ENST00000530618 TENM2Q9NT68 2774 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 IGHV3-48P01763 117 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 OR5G3P0C626 314 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 RPL7P18124 248 aaKnown RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 ORM2P19652 201 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 M6PRP20645 277 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 GALR1P47211 349 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 MFAP2P55001 183 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 CMC4P56277 68 aaPredicted RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 SYNJ2BPP57105 145 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 RHOBP62745 196 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 RPL11P62913 178 aaKnown RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 TIGITQ495A1 244 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 KHDC3LQ587J8 217 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 OXLD1Q5BKU9 147 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 TCTEX1D4Q5JR98 221 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 FFAR4Q5NUL3 377 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 C1orf194Q5T5A4 169 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 C10orf113Q5VZT2 155 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 LCN12Q6JVE5 192 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 DPPA3Q6W0C5 159 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 RBPMS2Q6ZRY4 209 aaKnown RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 TMUB2Q71RG4 321 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 BAP18Q8IXM2 172 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 HSD17B11Q8NBQ5 300 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 LRRC20Q8TCA0 184 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 GATAD1Q8WUU5 269 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 PHYHIPLQ96FC7 376 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 MRPL32Q9BYC8 188 aaKnown RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 C11orf1Q9H5F2 150 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 FNDC4Q9H6D8 234 aaPredicted RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 DNAJC4Q9NNZ3 241 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 SLC39A9Q9NUM3 307 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 CLEC5AQ9NY25 188 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 SIGLEC8Q9NYZ4 499 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 MRPL27Q9P0M9 148 aaKnown RBP3.68□□□□□ -1.82
SSBP3-213ENST00000530618 PXMP4Q9Y6I8 212 aa3.68□□□□□ -1.82
SSBP3-213ENST00000530618 DNAH17Q9UFH2 4485 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 IGHV4OR15-8A0A075B7B6 117 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 A0A087WW49 117 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 A0A1B0GVG6 124 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 RNF222A6NCQ9 220 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 PMS2P5A8MQ11 134 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 A8MWP6 167 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 SEC14L6B5MCN3 397 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 PRSS46E5RG02 174 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 PPP5D1E7EU14 171 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 SMLR1H3BR10 107 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 K7EIL1 84 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 DNASE2O00115 360 aaPredicted RBP3.67□□□□□ -1.82
SSBP3-213ENST00000530618 SAP30O75446 220 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 IFNA7P01567 189 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 HBE1P02100 147 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 CTSGP08311 255 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 SEC11BP0C7V7 166 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 PSG1P11464 419 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 ATF4P18848 351 aaPredicted RBP3.67□□□□□ -1.82
SSBP3-213ENST00000530618 PPT1P50897 306 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 PLP1P60201 277 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 RAB14P61106 215 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 SNRPD3P62318 126 aaKnown RBP3.67□□□□□ -1.82
SSBP3-213ENST00000530618 DEFA5Q01523 94 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 FHL3Q13643 280 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 KLF5Q13887 457 aaPredicted RBP3.67□□□□□ -1.82
SSBP3-213ENST00000530618 OPCMLQ14982 345 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 GUK1Q16774 197 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 DEFB136Q30KP8 78 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 TMEM41BQ5BJD5 291 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 FAM74A1Q5RGS3 127 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 C10orf99Q6UWK7 81 aa3.67□□□□□ -1.82
SSBP3-213ENST00000530618 C19orf35Q6ZS72 473 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms