RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 M6PRP20645 277 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 CBLN1P23435 193 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 CRYBB3P26998 211 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 GALR1P47211 349 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 SLURP1P55000 103 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 RAB2AP61019 212 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 DEFA5Q01523 94 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 GUK1Q16774 197 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 AKR1C8PQ5T2L2 129 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 HAPLN4Q86UW8 402 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 BAP18Q8IXM2 172 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 OR1B1Q8NGR6 318 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 OR2G3Q8NGZ4 309 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 STOML3Q8TAV4 291 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 LRRC20Q8TCA0 184 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 PHYHIPLQ96FC7 376 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 MGST2Q99735 147 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 GGTLC1Q9BX51 225 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 PXMP4Q9Y6I8 212 aa6.07□□□□□ -1.44
SSBP3-211ENST00000528787 FBN1P35555 2871 aaKnown RBP6.07□□□□□ -1.44
SSBP3-211ENST00000528787 IGKV1D-37A0A075B6S9 117 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 IGKV1OR2-108A0A075B7D4 117 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 WIPF1O43516 503 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 TRBV12-3P01733 135 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 ORM2P19652 201 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 PRR20EP86478 221 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 PRR20CP86479 221 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 PRR20DP86480 221 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 PRR20BP86481 221 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 PRR20AP86496 221 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 ZNF90Q03938 601 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 ARL16Q0P5N6 197 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 LGALSLQ3ZCW2 172 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-211ENST00000528787 KHDC3LQ587J8 217 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 Q5BKY6 102 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 BPIFA4PQ86YQ2 179 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 OR8I2Q8N0Y5 310 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 SPAG8Q99932 426 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-211ENST00000528787 ARV1Q9H2C2 271 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 ZFAND3Q9H8U3 227 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 SEPSECSQ9HD40 501 aaKnown RBP6.06□□□□□ -1.44
SSBP3-211ENST00000528787 SMPXQ9UHP9 88 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 STAB1Q9NY15 2570 aa6.06□□□□□ -1.44
SSBP3-211ENST00000528787 A0A1B0GVG6 124 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 TMEM213A2RRL7 107 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 OR4C46A6NHA9 309 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 G3V3Q6 166 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 SMLR1H3BR10 107 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 DNASE2O00115 360 aaPredicted RBP6.05□□□□□ -1.44
SSBP3-211ENST00000528787 ATF4P18848 351 aaPredicted RBP6.05□□□□□ -1.44
SSBP3-211ENST00000528787 CXCL2P19875 107 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 ID1P41134 155 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 RPL11P62913 178 aaKnown RBP6.05□□□□□ -1.44
SSBP3-211ENST00000528787 TMEM41BQ5BJD5 291 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 FFAR4Q5NUL3 377 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 PQLC2Q6ZP29 291 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 C18orf65Q6ZTR6 163 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 LINC00305Q7Z4B0 112 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 GTSCR1Q86UQ5 136 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 HSD17B11Q8NBQ5 300 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 DUX3Q96PT4 197 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 SHANK2-AS3Q9BTD1 123 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 RHPN1-AS1Q9BWJ2 59 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 ACTR3CQ9C0K3 210 aaPredicted RBP6.05□□□□□ -1.44
SSBP3-211ENST00000528787 VSIRQ9H7M9 311 aa6.05□□□□□ -1.44
SSBP3-211ENST00000528787 MRPL36Q9P0J6 103 aaKnown RBP6.05□□□□□ -1.44
SSBP3-211ENST00000528787 IGHV3-35A0A0C4DH35 117 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 ZNF98A6NK75 572 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 CHEK1O14757 476 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 TSPAN4O14817 238 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 HMGB3O15347 200 aaKnown RBP6.04□□□□□ -1.44
SSBP3-211ENST00000528787 BUB3O43684 328 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 CSN3P07498 182 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 SPP1P10451 314 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 PPT1P50897 306 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 SNRPD3P62318 126 aaKnown RBP6.04□□□□□ -1.44
SSBP3-211ENST00000528787 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 FAM74A1Q5RGS3 127 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 MIC13Q5XKP0 118 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
SSBP3-211ENST00000528787 UNQ9165/PRO28630Q6UXU0 137 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 SIGLEC15Q6ZMC9 328 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 OR11H4Q8NGC9 324 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 OR10G4Q8NGN3 311 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 OR10G9Q8NGN4 311 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 OR10G7Q8NGN6 311 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 FAM110AQ9BQ89 295 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 SLC25A39Q9BZJ4 359 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-211ENST00000528787 SLC25A32Q9H2D1 315 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 TMEM14CQ9P0S9 112 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 FUT9Q9Y231 359 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 U3KQE9 123 aa6.04□□□□□ -1.44
SSBP3-211ENST00000528787 ZNF785A8K8V0 405 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 H3BRN7 92 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 IFNA7P01567 189 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 HBE1P02100 147 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 CDC34P49427 236 aaPredicted RBP6.03□□□□□ -1.44
SSBP3-211ENST00000528787 PSG9Q00887 426 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms