RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 CANT1Q8WVQ1 401 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 ANP32BQ92688 251 aaKnown RBP1.32□□□□□ -2.2
BRCA2-203ENST00000528762 TEX37Q96LM6 180 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 MRPL32Q9BYC8 188 aaKnown RBP1.32□□□□□ -2.2
BRCA2-203ENST00000528762 MAP1LC3BQ9GZQ8 125 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 ASB4Q9Y574 426 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 ANKRD30AQ9BXX3 1397 aa1.32□□□□□ -2.2
BRCA2-203ENST00000528762 ARFGEF3Q5TH69 2177 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 ANKRD31Q8N7Z5 1873 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 CEP192Q8TEP8 1941 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 TRGV10A0A0A0MS01 117 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 TRBV6-5A0A0K0K1A5 114 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 GNG14A0A1W2PPG7 69 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 H3BQV1 296 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 TMEM256-PLSCR3K7ERE1 68 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 APOA2P02652 100 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 ASAH2BP0C7U1 165 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 ZNF705BP0CI00 300 aaPredicted RBP1.31□□□□□ -2.2
BRCA2-203ENST00000528762 MGST1P10620 155 aaKnown RBP1.31□□□□□ -2.2
BRCA2-203ENST00000528762 UBE2BP63146 152 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 BRMS1LQ5PSV4 323 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 C22orf39Q6P5X5 142 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 AKAP14Q86UN6 197 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 Q8IYB0 196 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.31□□□□□ -2.2
BRCA2-203ENST00000528762 SLC30A7Q8NEW0 376 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 ZNF563Q8TA94 476 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 GPER1Q99527 375 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 PRADC1Q9BSG0 188 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 OR2J1Q9GZK6 312 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 OR52A1Q9UKL2 312 aa1.31□□□□□ -2.2
BRCA2-203ENST00000528762 NUP210Q8TEM1 1887 aaPredicted RBP1.31□□□□□ -2.2
BRCA2-203ENST00000528762 MYO5AQ9Y4I1 1855 aaKnown RBP1.31□□□□□ -2.2
BRCA2-203ENST00000528762 KIAA1549Q9HCM3 1950 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 TRPM1Q7Z4N2 1603 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 TRAV3A0A0B4J244 114 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 PRORSD1PA6NEY8 169 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 NDUFB3O43676 98 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 PROSCO94903 275 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 TRGC2P03986 189 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 CRHP06850 196 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 MIFP14174 115 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 NFYBP25208 207 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 SSR2P43308 183 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 DYNLT1P63172 113 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 PATE2Q6UY27 113 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 PDZD9Q8IXQ8 264 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 FAM24BQ8N5W8 94 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 LINC00301Q8NCQ3 95 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 ZNF418Q8TF45 676 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-203ENST00000528762 RMND5BQ96G75 393 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-203ENST00000528762 Q96M85 177 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 RTL8AQ9BWD3 113 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 LRTM1Q9HBL6 345 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 OR5AC2Q9NZP5 309 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 RNF11Q9Y3C5 154 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 XIRP1Q702N8 1843 aaKnown RBP1.3□□□□□ -2.2
BRCA2-203ENST00000528762 ZFC3H1O60293 1989 aaKnown RBP1.3□□□□□ -2.2
BRCA2-203ENST00000528762 EXPH5Q8NEV8 1989 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 CD109Q6YHK3 1445 aa1.3□□□□□ -2.2
BRCA2-203ENST00000528762 HEATR1Q9H583 2144 aaKnown RBP1.3□□□□□ -2.2
BRCA2-203ENST00000528762 TRAV14DV4A0A0A6YYC5 116 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 LOC105371267A0A1B0GV96 52 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 H7BYZ3 331 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 OGNP20774 298 aaKnown RBP1.29□□□□□ -2.2
BRCA2-203ENST00000528762 DYNLT3P51808 116 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 RHOGP84095 191 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 MYL5Q02045 173 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 ESRGQ1W209 222 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 RNASE10Q5GAN6 216 aaKnown RBP1.29□□□□□ -2.2
BRCA2-203ENST00000528762 C10orf55Q5SWW7 151 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 SOSTDC1Q6X4U4 206 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 PHF5AQ7RTV0 110 aaKnown RBP1.29□□□□□ -2.2
BRCA2-203ENST00000528762 IFT20Q8IY31 132 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 NAA38Q9BRA0 125 aaKnown RBP1.29□□□□□ -2.2
BRCA2-203ENST00000528762 LINC00467Q9BRT7 94 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 ADAT1Q9BUB4 502 aaKnown RBP1.29□□□□□ -2.2
BRCA2-203ENST00000528762 BCL2L10Q9HD36 194 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 OTORQ9NRC9 128 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 HS3ST2Q9Y278 367 aa1.29□□□□□ -2.2
BRCA2-203ENST00000528762 TANC2Q9HCD6 1990 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 FREM3P0C091 2139 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 PRRC2BQ5JSZ5 2229 aaKnown RBP1.28□□□□□ -2.2
BRCA2-203ENST00000528762 TLCD2A6NGC4 264 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 OR1I1O60431 355 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 TIMM17BO60830 172 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 BRS3P32247 399 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 KRTAP12-4P60329 112 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 FKBP1CQ5VVH2 108 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 C1orf140Q5VVS0 124 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 TOMM20LQ6UXN7 152 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 LINC00311Q8N616 119 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 ST6GALNAC3Q8NDV1 305 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 TEX47Q8TBZ9 253 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 ZC2HC1AQ96GY0 325 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 C14orf132Q9NPU4 83 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 NUBP2Q9Y5Y2 271 aa1.28□□□□□ -2.2
BRCA2-203ENST00000528762 CEP164Q9UPV0 1460 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms