RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ID3Q02535 119 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 SAMD13Q5VXD3 122 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 S100A7AQ86SG5 101 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 LYG2Q86SG7 212 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 C9orf62Q8N4C0 152 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 OR11H7Q8NGC8 314 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 GLMPQ8WWB7 406 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 TRGV9Q99603 122 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 RARRES2Q99969 163 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 KLK5Q9Y337 293 aaPredicted RBP7.07□□□□□ -1.28
CHD7-208ENST00000528280 STRAPQ9Y3F4 350 aaKnown RBP7.07□□□□□ -1.28
CHD7-208ENST00000528280 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
CHD7-208ENST00000528280 A0A0J9YWU9 116 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 NUPR2A6NF83 97 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 ID1P41134 155 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 USF2Q15853 346 aaPredicted RBP7.06□□□□□ -1.28
CHD7-208ENST00000528280 C4orf46Q504U0 113 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 SIGLEC15Q6ZMC9 328 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 ZNF431Q8TF32 576 aaPredicted RBP7.06□□□□□ -1.28
CHD7-208ENST00000528280 DCANP1Q8TF63 244 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 MFFQ9GZY8 342 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 NRN1Q9NPD7 142 aa7.06□□□□□ -1.28
CHD7-208ENST00000528280 CXorf65A6NEN9 183 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
CHD7-208ENST00000528280 ZNF688P0C7X2 276 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 IAPPP10997 89 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 NKX2-1P43699 371 aaPredicted RBP7.05□□□□□ -1.28
CHD7-208ENST00000528280 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 SPATA31B1PQ5VZV4 182 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 LEMD1Q68G75 181 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 THAP8Q8NA92 274 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 SMIM8Q96KF7 97 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 RAB40CQ96S21 281 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 PBDC1Q9BVG4 233 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 C1QTNF4Q9BXJ3 329 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 MAGT1Q9H0U3 335 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 RNF24Q9Y225 148 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 HSPB11Q9Y547 144 aa7.05□□□□□ -1.28
CHD7-208ENST00000528280 MEOX2P50222 304 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 TAS2R30P59541 319 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 ZNF90Q03938 601 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 ZNF124Q15973 351 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 Q5BKY6 102 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 ACTL10Q5JWF8 245 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
CHD7-208ENST00000528280 TRPT1Q86TN4 253 aaKnown RBP7.04□□□□□ -1.28
CHD7-208ENST00000528280 OR8I2Q8N0Y5 310 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 BPIFCQ8NFQ6 507 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 OR4D5Q8NGN0 318 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 MITD1Q8WV92 249 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 GPR82Q96P67 336 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 PSENENQ9NZ42 101 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
CHD7-208ENST00000528280 IGKV1D-37A0A075B6S9 117 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 HMSDA8MTL9 139 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 FNDC10F2Z333 226 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 ADAP1O75689 374 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 IFNA7P01567 189 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 CXCL3P19876 107 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 LYZP61626 148 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 SELENOTP62341 195 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 PSMG4Q5JS54 123 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 TMEM144Q7Z5S9 345 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 FAM24BQ8N5W8 94 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 OR2T35Q8NGX2 323 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 C11orf68Q9H3H3 251 aaKnown RBP7.03□□□□□ -1.28
CHD7-208ENST00000528280 NPVFQ9HCQ7 196 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 MGAT4CQ9UBM8 478 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 FLVCR2Q9UPI3 526 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 BOLA1Q9Y3E2 137 aa7.03□□□□□ -1.28
CHD7-208ENST00000528280 MIFP14174 115 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 ANXA7P20073 488 aaKnown RBP7.02□□□□□ -1.29
CHD7-208ENST00000528280 GALR1P47211 349 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 PSMB3P49720 205 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 TCTAP57738 103 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 POLR2GP62487 172 aaKnown RBP eCLIP7.02□□□□□ -1.29
CHD7-208ENST00000528280 AKR1C1Q04828 323 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 FGL1Q08830 312 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 OR2F1Q13607 317 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 IAH1Q2TAA2 248 aaPredicted RBP7.02□□□□□ -1.29
CHD7-208ENST00000528280 TEX261Q6UWH6 196 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 OR10P1Q8NGE3 313 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 OR1B1Q8NGR6 318 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 TMEM147Q9BVK8 224 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 GGACTQ9BVM4 153 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 GSKIPQ9P0R6 139 aa7.02□□□□□ -1.29
CHD7-208ENST00000528280 LINC00862A6NCI5 91 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 KNCNA6PVL3 124 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 PRSS46E5RG02 174 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 ISLRO14498 428 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 TSC22D2O75157 780 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 DLK1P80370 383 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
CHD7-208ENST00000528280 PXDC1Q5TGL8 231 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms