RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 RCL1Q9Y2P8 373 aaKnown RBP8.88□□□□□ -0.99
TRAPPC4-209ENST00000528230 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 C7orf66A4D0T2 115 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 CA1P00915 261 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 METTL15P1P0C7V9 234 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 SELENOTP62341 195 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 PSMG4Q5JS54 123 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 OR8I2Q8N0Y5 310 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 TMEM217Q8N7C4 229 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 PPP1R14BQ96C90 147 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 RARRES2Q99969 163 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 GGACTQ9BVM4 153 aa8.87□□□□□ -0.99
TRAPPC4-209ENST00000528230 SMCO3A2RU48 225 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 C5orf51A6NDU8 294 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 KNCNA6PVL3 124 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 FAM25EA8MYX2 175 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 L7N2F9 121 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 CCSO14618 274 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 ID1P41134 155 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 PLP1P60201 277 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 VAMP2P63027 116 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 TMEM182Q6ZP80 229 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 CYP2G1PQ6ZSU1 146 aa8.86□□□□□ -0.99
TRAPPC4-209ENST00000528230 ZNF98A6NK75 572 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 K7EPK0 472 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 DEDDO75618 318 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 CCNKO75909 580 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 ORM2P19652 201 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 GATA2P23769 480 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 GALR1P47211 349 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 PSMB3P49720 205 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 MEOX2P50222 304 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 IFITM3Q01628 133 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 IL15RAQ13261 267 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 GSG1LQ6UXU4 331 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 S100A7AQ86SG5 101 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 OR11H2Q8NH07 326 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 ENKURQ8TC29 256 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 GPR82Q96P67 336 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 TMEM147Q9BVK8 224 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 GPN1Q9HCN4 374 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 MGAT4CQ9UBM8 478 aa8.85□□□□□ -0.99
TRAPPC4-209ENST00000528230 LCE6AA0A183 80 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 H3BMM0 161 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 ISLRO14498 428 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 SOCS3O14543 225 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 PVALBP20472 110 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 PXDC1Q5TGL8 231 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 OR1B1Q8NGR6 318 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 C11orf1Q9H5F2 150 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 RNF24Q9Y225 148 aa8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 LSM5Q9Y4Y9 91 aaKnown RBP8.84□□□□□ -0.99
TRAPPC4-209ENST00000528230 PRAF2O60831 178 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 HYPMO75409 117 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 HLA-DRB4P13762 266 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 RAP2BP61225 183 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 ARL16Q0P5N6 197 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 SPATA31B1PQ5VZV4 182 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 SLC25A39Q9BZJ4 359 aaPredicted RBP8.83□□□□□ -1
TRAPPC4-209ENST00000528230 SLC25A32Q9H2D1 315 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 C11orf68Q9H3H3 251 aaKnown RBP8.83□□□□□ -1
TRAPPC4-209ENST00000528230 SLC25A22Q9H936 323 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 HIGD1AQ9Y241 93 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 HLA-DRB4X5D2U9 266 aa8.83□□□□□ -1
TRAPPC4-209ENST00000528230 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
TRAPPC4-209ENST00000528230 H3BRN7 92 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 LINC00869P0C866 280 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 C4BPBP20851 252 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 BCAP31P51572 246 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 CAV2P51636 162 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 DEFA1P59665 94 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 DEFA3P59666 94 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 EWSR1Q01844 656 aaKnown RBP eCLIP8.82□□□□□ -1
TRAPPC4-209ENST00000528230 FOXI2Q6ZQN5 318 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 NRARPQ7Z6K4 114 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 LINC00052Q96N35 136 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 SHANK2-AS3Q9BTD1 123 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 RSG1Q9BU20 258 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 SAV1Q9H4B6 383 aaPredicted RBP8.82□□□□□ -1
TRAPPC4-209ENST00000528230 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
TRAPPC4-209ENST00000528230 NUPR2A6NF83 97 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 FAM24AA6NFZ4 105 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 ZNF705EA8MWA4 302 aaPredicted RBP8.81□□□□□ -1
TRAPPC4-209ENST00000528230 INMT-MINDY4F8WBC2 141 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 GOSR2O14653 212 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 AGPAT2O15120 278 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 JTBO76095 146 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 OR5G3P0C626 314 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 MIFP14174 115 aa8.81□□□□□ -1
TRAPPC4-209ENST00000528230 RPL7P18124 248 aaKnown RBP8.81□□□□□ -1
TRAPPC4-209ENST00000528230 S100A11P31949 105 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms