RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TMEM128Q5BJH2 165 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 TOMM5Q8N4H5 51 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 TRGV9Q99603 122 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 SOSTQ9BQB4 213 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 C7orf50Q9BRJ6 194 aaKnown RBP16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 SLIRPQ9GZT3 109 aaKnown RBP16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 RFNGQ9Y644 331 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 ZNF705FA8MVS1 300 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 ZNF705DP0CH99 300 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 ZNF705BP0CI00 300 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 AP3S2P59780 193 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 RPP30P78346 268 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 PSG9Q00887 426 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 SPATA31B1PQ5VZV4 182 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 GGNBP1Q5YKI7 109 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 LINC00336Q6ZUF6 198 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 C16orf92Q96LL3 132 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 SLC35B3Q9H1N7 401 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 GOLT1BQ9Y3E0 138 aa16.03■□□□□ 0.16
TRAPPC4-208ENST00000527680 F6UB75 175 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 M0R2N4 97 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 ISLRO14498 428 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 PITX3O75364 302 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 FAM78BQ5VT40 261 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 MAGT1Q9H0U3 335 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 SLC25A22Q9H936 323 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 RPRMQ9NS64 109 aa16.02■□□□□ 0.16
TRAPPC4-208ENST00000527680 WRBO00258 174 aa16.01■□□□□ 0.15
TRAPPC4-208ENST00000527680 CFDP00746 253 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-208ENST00000527680 IFNA21P01568 189 aa16.01■□□□□ 0.15
TRAPPC4-208ENST00000527680 GALR1P47211 349 aa16.01■□□□□ 0.15
TRAPPC4-208ENST00000527680 CLUHP3Q96NS8 147 aa16.01■□□□□ 0.15
TRAPPC4-208ENST00000527680 CIB3Q96Q77 187 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-208ENST00000527680 H3BMQ9 156 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 SOCS3O14543 225 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 SLC25A6P12236 298 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 HTN3P15516 51 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 FAM222AQ5U5X8 452 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 SAMD13Q5VXD3 122 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 UBE2DNLQ8IWF7 75 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 ZNF709Q8N972 641 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 NIPSNAP3BQ9BS92 247 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 RSG1Q9BU20 258 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 PLA2G2EQ9NZK7 142 aa16■□□□□ 0.15
TRAPPC4-208ENST00000527680 DNAH6Q9C0G6 4158 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 IGKV1OR2-108A0A075B7D4 117 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 SYNGR2O43760 224 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 HBE1P02100 147 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 HOXB5P09067 269 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 ORM2P19652 201 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 MEOX2P50222 304 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 ZNF79Q15937 498 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 SPANXN5Q5MJ07 72 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 THAP8Q8NA92 274 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 SLC25A21Q9BQT8 299 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 DKK2Q9UBU2 259 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 TMED3Q9Y3Q3 217 aa15.99■□□□□ 0.15
TRAPPC4-208ENST00000527680 TEX48A0A1B0GUV7 120 aa15.98■□□□□ 0.15
TRAPPC4-208ENST00000527680 PAX9P55771 341 aa15.98■□□□□ 0.15
TRAPPC4-208ENST00000527680 LRTM2Q8N967 370 aa15.98■□□□□ 0.15
TRAPPC4-208ENST00000527680 BPIFCQ8NFQ6 507 aa15.98■□□□□ 0.15
TRAPPC4-208ENST00000527680 TMEM208Q9BTX3 173 aa15.98■□□□□ 0.15
TRAPPC4-208ENST00000527680 A0A0J9YX75 114 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 ZNF98A6NK75 572 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 SFT2D2O95562 160 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 S100A7P31151 101 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 AKR1C1Q04828 323 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 RRN3P1Q2M238 152 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 SLC25A32Q9H2D1 315 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 DOK5Q9P104 306 aa15.97■□□□□ 0.15
TRAPPC4-208ENST00000527680 LOC102723971A0A1B0GUV8 181 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 GATA2P23769 480 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 PPP1R1AQ13522 171 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 C1orf158Q8N1D5 194 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 OR1B1Q8NGR6 318 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 FAM210BQ96KR6 192 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 C20orf173Q96LM9 149 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 TMEM147Q9BVK8 224 aa15.96■□□□□ 0.15
TRAPPC4-208ENST00000527680 S100A5P33763 92 aa15.95■□□□□ 0.14
TRAPPC4-208ENST00000527680 FGL1Q08830 312 aa15.95■□□□□ 0.14
TRAPPC4-208ENST00000527680 TRIM63Q969Q1 353 aa15.95■□□□□ 0.14
TRAPPC4-208ENST00000527680 SLC45A2Q9UMX9 530 aa15.95■□□□□ 0.14
TRAPPC4-208ENST00000527680 STRAPQ9Y3F4 350 aaKnown RBP15.95■□□□□ 0.14
TRAPPC4-208ENST00000527680 YTHDF2Q9Y5A9 579 aaKnown RBP15.95■□□□□ 0.14
TRAPPC4-208ENST00000527680 PRSS29PA6NIE9 313 aa15.94■□□□□ 0.14
TRAPPC4-208ENST00000527680 H3BP45 60 aa15.94■□□□□ 0.14
TRAPPC4-208ENST00000527680 IGLV2-18A0A075B6J9 118 aa15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 SMCO3A2RU48 225 aa15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 CCDC160A6NGH7 325 aa15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 DAD1P61803 113 aa15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 TMEM182Q6ZP80 229 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 OR4D5Q8NGN0 318 aa15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 GPR82Q96P67 336 aa15.93■□□□□ 0.14
TRAPPC4-208ENST00000527680 OXA1LQ15070 435 aa15.92■□□□□ 0.14
TRAPPC4-208ENST00000527680 IGFL4Q6B9Z1 124 aa15.92■□□□□ 0.14
TRAPPC4-208ENST00000527680 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.92■□□□□ 0.14
TRAPPC4-208ENST00000527680 IGF2BP2-AS1Q96M15 143 aa15.92■□□□□ 0.14
TRAPPC4-208ENST00000527680 V9GYH0 126 aa15.92■□□□□ 0.14
TRAPPC4-208ENST00000527680 HECTD4Q9Y4D8 3996 aa15.91■□□□□ 0.14
TRAPPC4-208ENST00000527680 PRSS46E5RG02 174 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms