RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 LRRC75A-AS1Q8N1F1 130 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 C2orf88Q9BSF0 95 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 ABCA2Q9BZC7 2435 aa12.78□□□□□ -0.36
SNRNP35-204ENST00000527158 PLA2G2AP14555 144 aa12.78□□□□□ -0.36
SNRNP35-204ENST00000527158 ORM2P19652 201 aa12.78□□□□□ -0.36
SNRNP35-204ENST00000527158 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
SNRNP35-204ENST00000527158 KLF17Q5JT82 389 aaPredicted RBP12.78□□□□□ -0.36
SNRNP35-204ENST00000527158 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
SNRNP35-204ENST00000527158 IGLV11-55A0A075B6I3 123 aa12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 IGLC1P0CG04 106 aa12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 EGR2P11161 476 aaPredicted RBP12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 PATE2Q6UY27 113 aa12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 HSPB9Q9BQS6 159 aa12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 YTHDF2Q9Y5A9 579 aaKnown RBP12.77□□□□□ -0.36
SNRNP35-204ENST00000527158 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 A0A096LNT2 108 aa12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 OR10J4P0C629 311 aa12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 LOXL1Q08397 574 aaPredicted RBP12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 CRYBG3Q68DQ2 2970 aa12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 GSX1Q9H4S2 264 aaPredicted RBP12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 MOB4Q9Y3A3 225 aa12.77□□□□□ -0.37
SNRNP35-204ENST00000527158 HYPMO75409 117 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 C5orf56Q8N8D9 126 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 TMUB1Q9BVT8 246 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 ZNF355PQ9NSJ1 428 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 ESDP10768 282 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 TAS2R60P59551 318 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 TMEM219Q86XT9 240 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 OR5AU1Q8NGC0 362 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 ZNF503Q96F45 646 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 SLC25A2Q9BXI2 301 aa12.76□□□□□ -0.37
SNRNP35-204ENST00000527158 TRAV5A0A0B4J249 113 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 J3QLI3 93 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 MT-ND6P03923 174 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 MFAP4P55083 255 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 PLP1P60201 277 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 RAB4BP61018 213 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 TIGITQ495A1 244 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 MORN5Q5VZ52 161 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 UNQ5815/PRO19632Q6UWF5 114 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 FAM167A-AS1Q96KT0 104 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
SNRNP35-204ENST00000527158 TRAV30A0A087WSZ9 112 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 TGFAP01135 160 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 AVPP01185 164 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 PSG1P11464 419 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 TPPP2P59282 170 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 Q5PR19 223 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 STXBP6Q8NFX7 210 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 UBE2L3P68036 154 aaKnown RBP12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 ECSCRQ19T08 205 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 PAXXQ9BUH6 204 aa12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
SNRNP35-204ENST00000527158 GNG7O60262 68 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 IGKV1-17P01599 117 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 ADMP35318 185 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 GNG4P50150 75 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 MAPK1IP1LQ8NDC0 245 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 FAM110DQ8TAY7 271 aaPredicted RBP12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 MS4A10Q96PG2 267 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 GNB1LQ9BYB4 327 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 OSTCQ9NRP0 149 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 C21orf62Q9NYP8 219 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 A0A1W2PRE2 83 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 HELTA6NFD8 242 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 PGPEP1LA6NFU8 196 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 LYZP61626 148 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 C1orf194Q5T5A4 169 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 ZNF48Q96MX3 618 aaPredicted RBP12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 NAGKQ9UJ70 344 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 HIGD1AQ9Y241 93 aa12.73□□□□□ -0.37
SNRNP35-204ENST00000527158 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 OR2J3O76001 311 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 SCGB1D1O95968 90 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 Q0VG73 95 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 Q56UQ5 140 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 FBXL7Q9UJT9 491 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 FBN2P35556 2912 aa12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 KMT2BQ9UMN6 2715 aaPredicted RBP12.72□□□□□ -0.37
SNRNP35-204ENST00000527158 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 H3BUX3 64 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 NDUFB8O95169 186 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 CRISP2P16562 243 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 ERVFC1-1P60608 527 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 MBD6Q96DN6 1003 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 MRPL18Q9H0U6 180 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms