RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 TMEM147Q9BVK8 224 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 MED28Q9H204 178 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 SRD5A3Q9H8P0 318 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 UQCC1Q9NVA1 299 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 WDR83OSQ9Y284 106 aa12.85□□□□□ -0.35
LMX1B-203ENST00000526117 K7EQG2 157 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 CXCL3P19876 107 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 LRRC37A5PQ49AS3 106 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 S100A7AQ86SG5 101 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 SBSPONQ8IVN8 264 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 STPG3Q8N7X2 389 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 TM2D3Q9BRN9 247 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 WFDC10AQ9H1F0 79 aa12.84□□□□□ -0.35
LMX1B-203ENST00000526117 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
LMX1B-203ENST00000526117 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
LMX1B-203ENST00000526117 DNASE2O00115 360 aaPredicted RBP12.83□□□□□ -0.36
LMX1B-203ENST00000526117 AGPAT2O15120 278 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 MPDU1O75352 247 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
LMX1B-203ENST00000526117 LINC00869P0C866 280 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.36
LMX1B-203ENST00000526117 RAB31Q13636 194 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 OR11H7Q8NGC8 314 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 GPR82Q96P67 336 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 MGST2Q99735 147 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 RNF24Q9Y225 148 aa12.83□□□□□ -0.36
LMX1B-203ENST00000526117 GATA2P23769 480 aaPredicted RBP12.82□□□□□ -0.36
LMX1B-203ENST00000526117 RPL11P62913 178 aaKnown RBP12.82□□□□□ -0.36
LMX1B-203ENST00000526117 FCN2Q15485 313 aa12.82□□□□□ -0.36
LMX1B-203ENST00000526117 CITED4Q96RK1 184 aa12.82□□□□□ -0.36
LMX1B-203ENST00000526117 MAP6D1Q9H9H5 199 aa12.82□□□□□ -0.36
LMX1B-203ENST00000526117 ZNF98A6NK75 572 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 H3BRN7 92 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 HYPMO75409 117 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 GIPP09681 153 aaPredicted RBP12.81□□□□□ -0.36
LMX1B-203ENST00000526117 HAGHQ16775 308 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 SAMD13Q5VXD3 122 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 GBGT1Q8N5D6 347 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 STXBP6Q8NFX7 210 aa12.81□□□□□ -0.36
LMX1B-203ENST00000526117 IGKV3-7A0A075B6H7 116 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 ORM2P19652 201 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 RPL29P47914 159 aaKnown RBP12.8□□□□□ -0.36
LMX1B-203ENST00000526117 CAMLGP49069 296 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 RAP2BP61225 183 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 PRR20EP86478 221 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 PRR20CP86479 221 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 PRR20DP86480 221 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 PRR20BP86481 221 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 PRR20AP86496 221 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 NHLH2Q02577 135 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 FGL1Q08830 312 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 OR1B1Q8NGR6 318 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 SHANK2-AS3Q9BTD1 123 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 GGTLC1Q9BX51 225 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 SLC25A39Q9BZJ4 359 aaPredicted RBP12.8□□□□□ -0.36
LMX1B-203ENST00000526117 MBD2Q9UBB5 411 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 UBQLN2Q9UHD9 624 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
LMX1B-203ENST00000526117 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-203ENST00000526117 LOC102724200A0A096LPH7 203 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-203ENST00000526117 KIR2DL5BA0A0G2JN68 375 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 KIR2DL5BA0A0G2JPC4 375 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 TFPI2P48307 235 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 MEOX2P50222 304 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 OPCMLQ14982 345 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 KIR2DL5AQ8N109 375 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 PPP1R14BQ96C90 147 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
LMX1B-203ENST00000526117 RPL12P30050 165 aaKnown RBP12.78□□□□□ -0.36
LMX1B-203ENST00000526117 GALR1P47211 349 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 PATE2Q6UY27 113 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 OR8I2Q8N0Y5 310 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 FAM24BQ8N5W8 94 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 ASCL2Q99929 193 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 U3KQK5 164 aa12.78□□□□□ -0.36
LMX1B-203ENST00000526117 SOCS3O14543 225 aa12.77□□□□□ -0.37
LMX1B-203ENST00000526117 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
LMX1B-203ENST00000526117 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.37
LMX1B-203ENST00000526117 PARD6GQ9BYG4 376 aaPredicted RBP12.77□□□□□ -0.37
LMX1B-203ENST00000526117 ARV1Q9H2C2 271 aa12.77□□□□□ -0.37
LMX1B-203ENST00000526117 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
LMX1B-203ENST00000526117 UBE2CO00762 179 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 OR5G3P0C626 314 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
LMX1B-203ENST00000526117 FGF7P21781 194 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 PSMB3P49720 205 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 APOC4P55056 127 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 DEFB131AP59861 70 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 Q6ZRG5 221 aa12.76□□□□□ -0.37
LMX1B-203ENST00000526117 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms