RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 OR10G8Q8NGN5 311 aa11.96□□□□□ -0.49
BEST1-204ENST00000524926 TRGC2P03986 189 aa11.96□□□□□ -0.5
BEST1-204ENST00000524926 FCGR2BP31994 310 aaPredicted RBP11.96□□□□□ -0.5
BEST1-204ENST00000524926 SRP14P37108 136 aaKnown RBP11.96□□□□□ -0.5
BEST1-204ENST00000524926 RHOGP84095 191 aa11.96□□□□□ -0.5
BEST1-204ENST00000524926 OR5I1Q13606 314 aa11.96□□□□□ -0.5
BEST1-204ENST00000524926 TMEM68Q96MH6 324 aa11.96□□□□□ -0.5
BEST1-204ENST00000524926 WI2-2373I1.2A0A1W2PRP0 233 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 PEX7O00628 323 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 SCGB2A1O75556 95 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 AMY1AP04745 511 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
BEST1-204ENST00000524926 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
BEST1-204ENST00000524926 FAM3BP58499 235 aaPredicted RBP11.95□□□□□ -0.5
BEST1-204ENST00000524926 GNG5P63218 68 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 MS4A10Q96PG2 267 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 SHANK2-AS3Q9BTD1 123 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST1-204ENST00000524926 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 TGFAP01135 160 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 ERVFC1-1P60608 527 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 USF2Q15853 346 aaPredicted RBP11.95□□□□□ -0.5
BEST1-204ENST00000524926 SMUG1Q53HV7 270 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 VN1R17PQ8TDU5 208 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 LINC00527Q9UJ94 153 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 RPH3ALQ9UNE2 315 aa11.95□□□□□ -0.5
BEST1-204ENST00000524926 A0A096LNT2 108 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 TRAV34A0A0B4J273 112 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 CTSGP08311 255 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 MYCNOSP40205 109 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 TXN2Q99757 166 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 PYGO2Q9BRQ0 406 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 TMEM14CQ9P0S9 112 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 EPDR1Q9UM22 224 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 PPP5D1E7EU14 171 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 H3BRN7 92 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 HIST1H1EP10412 219 aaKnown RBP11.94□□□□□ -0.5
BEST1-204ENST00000524926 MGST1P10620 155 aaKnown RBP11.94□□□□□ -0.5
BEST1-204ENST00000524926 BPIFA4PQ86YQ2 179 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 BCL6BQ8N143 479 aaPredicted RBP11.94□□□□□ -0.5
BEST1-204ENST00000524926 Q9H3A6 140 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 ZNF586Q9NXT0 402 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 CDC42EP3Q9UKI2 254 aa11.94□□□□□ -0.5
BEST1-204ENST00000524926 PTPN13Q12923 2485 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 GPR183P32249 361 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 TAS2R60P59551 318 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 DEFB113Q30KQ7 82 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 S100A7AQ86SG5 101 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
BEST1-204ENST00000524926 USP9YO00507 2555 aaPredicted RBP11.93□□□□□ -0.5
BEST1-204ENST00000524926 TRBV9A0A0B4J1U6 114 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 TRAV41A0A0B4J266 112 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 IGHV3-35A0A0C4DH35 117 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 ZNF98A6NK75 572 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 SLC17A3O00476 420 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 TGOLN2O43493 480 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 CLEC3BP05452 202 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 AKR1D1P51857 326 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 IGF2BP2-AS1Q96M15 143 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 BEX4Q9NWD9 120 aaPredicted RBP11.92□□□□□ -0.5
BEST1-204ENST00000524926 GGCTO75223 188 aaKnown RBP11.92□□□□□ -0.5
BEST1-204ENST00000524926 OR4F17Q8NGA8 305 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 SGK494Q96LW2 274 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 SRD5A3Q9H8P0 318 aa11.92□□□□□ -0.5
BEST1-204ENST00000524926 A6NDX4 124 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 ISLRO14498 428 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 ADMP35318 185 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 UBE2G1P62253 170 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 FOXL1Q12952 345 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 GCGP01275 180 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 LOXL1Q08397 574 aaPredicted RBP11.91□□□□□ -0.5
BEST1-204ENST00000524926 Q5PR19 223 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 RNASE7Q9H1E1 156 aaKnown RBP11.91□□□□□ -0.5
BEST1-204ENST00000524926 GNB4Q9HAV0 340 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 PITPNC1Q9UKF7 332 aa11.91□□□□□ -0.5
BEST1-204ENST00000524926 IGHV3OR16-8A0A075B7F1 116 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 CLEC19AQ6UXS0 136 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 EXOC3-AS1Q8N2X6 119 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 C17orf77Q96MU5 243 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 ZNF320A2RRD8 509 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 AP4M1O00189 453 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 FRZBQ92765 325 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 EEF1AKMT3Q96AZ1 226 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 ATG101Q9BSB4 218 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 OTORQ9NRC9 128 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
BEST1-204ENST00000524926 TRBV19A0A075B6N1 114 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms