RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 RAB11AP62491 216 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 ZNF79Q15937 498 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 SPATA31B1PQ5VZV4 182 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 TRGV9Q99603 122 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 PAIP2BQ9ULR5 123 aaKnown RBP11.62□□□□□ -0.55
HIF3A-208ENST00000524533 GOLT1BQ9Y3E0 138 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 DNAH2Q9P225 4427 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 F6UB75 175 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 M0R2N4 97 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
HIF3A-208ENST00000524533 PAX9P55771 341 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 FAM222AQ5U5X8 452 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 SAMD13Q5VXD3 122 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 GSG1LQ6UXU4 331 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 TMED4Q7Z7H5 227 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 UBE2DNLQ8IWF7 75 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 BCL7BQ9BQE9 202 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
HIF3A-208ENST00000524533 PKHD1P08F94 4074 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 A0A0J9YX75 114 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 FABP12A6NFH5 140 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 PRSS29PA6NIE9 313 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 PITX3O75364 302 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 IFNA21P01568 189 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 MEOX2P50222 304 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 TMBIM6P55061 237 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 PSG9Q00887 426 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 THAP8Q8NA92 274 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 C7orf50Q9BRJ6 194 aaKnown RBP11.6□□□□□ -0.55
HIF3A-208ENST00000524533 NIPSNAP3BQ9BS92 247 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
HIF3A-208ENST00000524533 IGKV1OR2-108A0A075B7D4 117 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 LOC102723971A0A1B0GUV8 181 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 RTL8CO15255 209 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 NOL3O60936 208 aaKnown RBP11.59□□□□□ -0.55
HIF3A-208ENST00000524533 CFDP00746 253 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-208ENST00000524533 HBE1P02100 147 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 VAMP1P23763 118 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 TNFSF8P32971 234 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 GALR1P47211 349 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 TMEM128Q5BJH2 165 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 SLIRPQ9GZT3 109 aaKnown RBP11.59□□□□□ -0.55
HIF3A-208ENST00000524533 SLC25A22Q9H936 323 aa11.59□□□□□ -0.55
HIF3A-208ENST00000524533 MED6O75586 246 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 SLC25A6P12236 298 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 HTN3P15516 51 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 LGALS9BQ3B8N2 356 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 GGNBP1Q5YKI7 109 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-208ENST00000524533 SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 SLC25A32Q9H2D1 315 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 DOK5Q9P104 306 aa11.58□□□□□ -0.56
HIF3A-208ENST00000524533 YTHDF2Q9Y5A9 579 aaKnown RBP11.58□□□□□ -0.56
HIF3A-208ENST00000524533 IGLV2-18A0A075B6J9 118 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 AP3S2P59780 193 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 RPP30P78346 268 aaKnown RBP11.57□□□□□ -0.56
HIF3A-208ENST00000524533 OXA1LQ15070 435 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 RRN3P1Q2M238 152 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 TOMM5Q8N4H5 51 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 LRTM2Q8N967 370 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 MCFD2Q8NI22 146 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 TRIM63Q969Q1 353 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 C20orf173Q96LM9 149 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 MAGT1Q9H0U3 335 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 SLC45A2Q9UMX9 530 aa11.57□□□□□ -0.56
HIF3A-208ENST00000524533 ZNF98A6NK75 572 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 PRSS46E5RG02 174 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 H3BMQ9 156 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 SYNGR2O43760 224 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 BPIFCQ8NFQ6 507 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
HIF3A-208ENST00000524533 A8MTW9 85 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 WRBO00258 174 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 ORM2P19652 201 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 DAD1P61803 113 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 AKR1C1Q04828 323 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 PYDC2Q56P42 97 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 OR1B1Q8NGR6 318 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 GPR82Q96P67 336 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 RSG1Q9BU20 258 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 PKD1P98161 4303 aa11.55□□□□□ -0.56
HIF3A-208ENST00000524533 H3BP45 60 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 SFT2D2O95562 160 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 MED14OSP0DP75 135 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 GATA2P23769 480 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-208ENST00000524533 S100A7P31151 101 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms