RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 TFPI2P48307 235 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 PLP1P60201 277 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 FCN2Q15485 313 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 VWC2Q2TAL6 325 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 PXDC1Q5TGL8 231 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ZNF546Q86UE3 836 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 GBGT1Q8N5D6 347 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 MS4A6AQ9H2W1 248 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 SRD5A3Q9H8P0 318 aa12.39□□□□□ -0.43
CSGALNACT1-216ENST00000524213 AGPAT2O15120 278 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 LINC00869P0C866 280 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ORM2P19652 201 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 GATA2P23769 480 aaPredicted RBP12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 RAP2BP61225 183 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 SIGLEC15Q6ZMC9 328 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 WFDC3Q8IUB2 231 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 THAP6Q8TBB0 222 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 RNF24Q9Y225 148 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 WDR83OSQ9Y284 106 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 U3KQK5 164 aa12.38□□□□□ -0.43
CSGALNACT1-216ENST00000524213 CXCL3P19876 107 aa12.37□□□□□ -0.43
CSGALNACT1-216ENST00000524213 FGL1Q08830 312 aa12.37□□□□□ -0.43
CSGALNACT1-216ENST00000524213 TMEM182Q6ZP80 229 aaPredicted RBP12.37□□□□□ -0.43
CSGALNACT1-216ENST00000524213 OR11H7Q8NGC8 314 aa12.37□□□□□ -0.43
CSGALNACT1-216ENST00000524213 UBQLN2Q9UHD9 624 aa12.37□□□□□ -0.43
CSGALNACT1-216ENST00000524213 K7EQG2 157 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 MPDU1O75352 247 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 HYPMO75409 117 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 LYL1P12980 280 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 CAMLGP49069 296 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 NHLH2Q02577 135 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ODF3L2Q3SX64 289 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 MGST2Q99735 147 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 MBD2Q9UBB5 411 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 HIGD1AQ9Y241 93 aa12.36□□□□□ -0.43
CSGALNACT1-216ENST00000524213 TENM3Q9P273 2699 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 HUWE1Q7Z6Z7 4374 aaKnown RBP12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 GIPP09681 153 aaPredicted RBP12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 OR5G3P0C626 314 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 LINC00322Q6ZN03 302 aaPredicted RBP12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 OR8I2Q8N0Y5 310 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 OR5C1Q8NGR4 320 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 GPR82Q96P67 336 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 NRN1Q9NPD7 142 aa12.35□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ZNF98A6NK75 572 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 H3BRN7 92 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 RPL12P30050 165 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 GALR1P47211 349 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 Q6ZRG5 221 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 DCANP1Q8TF63 244 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 SLC25A39Q9BZJ4 359 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ARL6Q9H0F7 186 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ZMAT4Q9H898 229 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 DOK5Q9P104 306 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 HSPB11Q9Y547 144 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 STAB2Q8WWQ8 2551 aa12.34□□□□□ -0.43
CSGALNACT1-216ENST00000524213 ELOA3CA0A087WX78 387 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 LOC102724200A0A096LPH7 203 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 FGF7P21781 194 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 RPL29P47914 159 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 OPCMLQ14982 345 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 SAMD13Q5VXD3 122 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 WWC2-AS2Q96NR7 200 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 GGTLC1Q9BX51 225 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
CSGALNACT1-216ENST00000524213 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 COX7A2P2O60397 106 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 MEOX2P50222 304 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 DEFB131AP59861 70 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 SNRPD3P62318 126 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 CLINT1Q14677 625 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 HAGHQ16775 308 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 OR1L4Q8NGR5 311 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 RCHY1Q96PM5 261 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 ATP5SQ99766 215 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 SLC25A22Q9H936 323 aa12.32□□□□□ -0.44
CSGALNACT1-216ENST00000524213 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 ID1P41134 155 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 B2MP61769 119 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 PRR20EP86478 221 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 PRR20CP86479 221 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 PRR20DP86480 221 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 PRR20BP86481 221 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 PRR20AP86496 221 aa12.31□□□□□ -0.44
CSGALNACT1-216ENST00000524213 MIC13Q5XKP0 118 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms