RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 DEFA3P59666 94 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 PSMG4Q5JS54 123 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 TMEM217Q8N7C4 229 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 OR1B1Q8NGR6 318 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 SCRT1Q9BWW7 348 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 SLC25A32Q9H2D1 315 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 NRN1Q9NPD7 142 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 DNAH7Q8WXX0 4024 aa13.12□□□□□ -0.31
CLK4-211ENST00000522556 PRAF2O60831 178 aa13.11□□□□□ -0.31
CLK4-211ENST00000522556 H2BFSP57053 126 aa13.11□□□□□ -0.31
CLK4-211ENST00000522556 ZFAND6Q6FIF0 208 aa13.11□□□□□ -0.31
CLK4-211ENST00000522556 BPIFCQ8NFQ6 507 aa13.11□□□□□ -0.31
CLK4-211ENST00000522556 PPP1R14BQ96C90 147 aa13.11□□□□□ -0.31
CLK4-211ENST00000522556 SLC25A22Q9H936 323 aa13.11□□□□□ -0.31
CLK4-211ENST00000522556 H0YIZ8 118 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 SOCS3O14543 225 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 LINC00869P0C866 280 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 EWSR1Q01844 656 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLK4-211ENST00000522556 LRRC37A5PQ49AS3 106 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 MGST2Q99735 147 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 OR5AC2Q9NZP5 309 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 MGAT4CQ9UBM8 478 aa13.1□□□□□ -0.31
CLK4-211ENST00000522556 KIR2DL5BA0A0G2JN68 375 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 KIR2DL5BA0A0G2JPC4 375 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 FNDC10F2Z333 226 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 H3BRN7 92 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 GIG44P09565 113 aaPredicted RBP13.09□□□□□ -0.31
CLK4-211ENST00000522556 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
CLK4-211ENST00000522556 ACTL10Q5JWF8 245 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 PATE2Q6UY27 113 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 Q6ZWC4 215 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 TRPT1Q86TN4 253 aaKnown RBP13.09□□□□□ -0.31
CLK4-211ENST00000522556 KIR2DL5AQ8N109 375 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 KIR2DL5BQ8NHK3 375 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 NPVFQ9HCQ7 196 aa13.09□□□□□ -0.31
CLK4-211ENST00000522556 LYRM2Q9NU23 88 aaPredicted RBP13.09□□□□□ -0.31
CLK4-211ENST00000522556 AGPAT2O15120 278 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 SPRY2O43597 315 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 DEDDO75618 318 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 C4BPBP20851 252 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 AP2S1P53680 142 aaPredicted RBP13.08□□□□□ -0.32
CLK4-211ENST00000522556 CASC10Q5T4H9 136 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 GDF5OSQ5U4N7 250 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 RNF183Q96D59 192 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 CSTL1Q9H114 145 aa13.08□□□□□ -0.32
CLK4-211ENST00000522556 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
CLK4-211ENST00000522556 NUP62P37198 522 aaPredicted RBP13.07□□□□□ -0.32
CLK4-211ENST00000522556 C1orf194Q5T5A4 169 aa13.07□□□□□ -0.32
CLK4-211ENST00000522556 TEPPQ6URK8 271 aa13.07□□□□□ -0.32
CLK4-211ENST00000522556 STHQ8IWL8 128 aa13.07□□□□□ -0.32
CLK4-211ENST00000522556 C20orf173Q96LM9 149 aa13.07□□□□□ -0.32
CLK4-211ENST00000522556 TMEM147Q9BVK8 224 aa13.07□□□□□ -0.32
CLK4-211ENST00000522556 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
CLK4-211ENST00000522556 SLC45A2Q9UMX9 530 aa13.07□□□□□ -0.32
CLK4-211ENST00000522556 UBE2L5PA0A1B0GUS4 154 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 C3orf84H3BNL1 204 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 UBE2CO00762 179 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
CLK4-211ENST00000522556 OR5G3P0C626 314 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
CLK4-211ENST00000522556 PLP1P60201 277 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 MORN5Q5VZ52 161 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 NMES1Q9C002 83 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 HIGD1AQ9Y241 93 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 ALG5Q9Y673 324 aa13.06□□□□□ -0.32
CLK4-211ENST00000522556 KMT2CQ8NEZ4 4911 aaKnown RBP13.05□□□□□ -0.32
CLK4-211ENST00000522556 A0A0J9YWU9 116 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 SSNA1O43805 119 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 PRB4P10163 310 aaPredicted RBP13.05□□□□□ -0.32
CLK4-211ENST00000522556 LYL1P12980 280 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 SULT1A1P50225 295 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 NHLH2Q02577 135 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 MIC13Q5XKP0 118 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 IGFL4Q6B9Z1 124 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 GGACTQ9BVM4 153 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 FBXL17Q9UF56 701 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 WDR83OSQ9Y284 106 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 TP53TG1Q9Y2A0 90 aa13.05□□□□□ -0.32
CLK4-211ENST00000522556 STARD9Q9P2P6 4700 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 F6UB75 175 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 HYPMO75409 117 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 SELENOTP62341 195 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 ZNF546Q86UE3 836 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 LINC00052Q96N35 136 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 RSG1Q9BU20 258 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 CLEC5AQ9NY25 188 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
CLK4-211ENST00000522556 CXCL3P19876 107 aa13.03□□□□□ -0.32
CLK4-211ENST00000522556 RAP2BP61225 183 aa13.03□□□□□ -0.32
CLK4-211ENST00000522556 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms