RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 OR4C12Q96R67 309 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 SSX3Q99909 188 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 RASL11BQ9BPW5 248 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 SMIM3Q9BZL3 60 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 C11orf1Q9H5F2 150 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 PLEKHA3Q9HB20 300 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 LYRM2Q9NU23 88 aaPredicted RBP2.94□□□□□ -1.94
CLK4-207ENST00000520909 SIGLEC9Q9Y336 463 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 STRAPQ9Y3F4 350 aaKnown RBP2.94□□□□□ -1.94
CLK4-207ENST00000520909 PLXNB1O43157 2135 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 CR1P17927 2039 aa2.94□□□□□ -1.94
CLK4-207ENST00000520909 MDFIC2A0A1B0GVS7 189 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 H3BUX3 64 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 CD5LO43866 347 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 NDUFA3O95167 84 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 CA2P00918 260 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 IFNA4P05014 189 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 REG1AP05451 166 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR8U8P0C7N1 319 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 APELAP0DMC3 54 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR13C7P0DN81 318 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 HNF1AP20823 631 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 MAS1LP35410 378 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SNCAP37840 140 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 VDAC2P45880 294 aaPredicted RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 SULT1A1P50225 295 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 DYNLT3P51808 116 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 XGP55808 180 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 RAB11AP62491 216 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 ERHP84090 104 aaKnown RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 PRCDQ00LT1 54 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 EWSR1Q01844 656 aaKnown RBP eCLIP2.93□□□□□ -1.94
CLK4-207ENST00000520909 EBI3Q14213 229 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 ZNF345Q14585 488 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 CLINT1Q14677 625 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 FXYD3Q14802 87 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR8G2PQ6IF36 304 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 TEX38Q6PEX7 206 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 IL17RELQ6ZVW7 336 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 STX12Q86Y82 276 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 TEX29Q8N6K0 151 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 TMEM252Q8N6L7 170 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR10W1Q8NGF6 305 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR8H1Q8NGG4 311 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR1S2Q8NGQ3 325 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR5B3Q8NH48 314 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 PIFOQ8TCI5 191 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SSMEM1Q8WWF3 244 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 ZNF471Q9BX82 626 aaPredicted RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 WFDC1Q9HC57 220 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 NDUFA4L2Q9NRX3 87 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 ZNF257Q9Y2Q1 563 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 WSB1Q9Y6I7 421 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 MTORP42345 2549 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OTOGQ6ZRI0 2925 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 MXRA5Q9NR99 2828 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 HIVEP2P31629 2446 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 BORCS7-ASMTA0A0B4J1R7 106 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 A0A1B0GW64 132 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SMCO3A2RU48 225 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 A6NDX4 124 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 BTBD17A6NE02 478 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 E7EUB6 86 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 TAAR5O14804 337 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 LY6G6DO95868 133 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 IFNA5P01569 189 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 RNASE2P10153 161 aaKnown RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 AREGP15514 252 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 NPY1RP25929 384 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 HTR2BP41595 481 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SUB1P53999 127 aaKnown RBP eCLIP2.93□□□□□ -1.94
CLK4-207ENST00000520909 UBA52P62987 128 aaKnown RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 HBG1P69891 147 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 HBG2P69892 147 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 IFITM2Q01629 132 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 WT1-ASQ06250 92 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 BAXQ07812 192 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SLC38A11Q08AI6 406 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 AANATQ16613 207 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 C9orf152Q5JTZ5 239 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 RPL7L1Q6DKI1 246 aaKnown RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 SLC25A24Q6NUK1 477 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 TMEM14EPQ6UXP3 125 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 ZNF562Q6V9R5 426 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 C19orf35Q6ZS72 473 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SLC51BQ86UW2 128 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SIGLECL1Q8N7X8 197 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 Q8N9W7 124 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR10P1Q8NGE3 313 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 OR5C1Q8NGR4 320 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SRSF12Q8WXF0 261 aaKnown RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 ARPC1AQ92747 370 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 RBM14Q96PK6 669 aaKnown RBP2.93□□□□□ -1.94
CLK4-207ENST00000520909 ATP5SQ99766 215 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 SMR3AQ99954 134 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 GON7Q9BXV9 100 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 PARLQ9H300 379 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 PARP11Q9NR21 331 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 CYTL1Q9NRR1 136 aa2.93□□□□□ -1.94
CLK4-207ENST00000520909 PITPNC1Q9UKF7 332 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms