RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 Q5BKY6 102 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 COMMD7Q86VX2 200 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 KIR2DL5AQ8N109 375 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 KIR2DL5BQ8NHK3 375 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 COQ8AQ8NI60 647 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 MITD1Q8WV92 249 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 ASB13Q8WXK3 278 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 TMEM230Q96A57 120 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 ZNF503Q96F45 646 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 SEC22AQ96IW7 307 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 RTBDNQ9BSG5 229 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 A0A0B4J2A0 478 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 CRYM-AS1A6NIL9 109 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 CHEK1O14757 476 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 NUPL2O15504 423 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 S100GP29377 79 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 BMI1P35226 326 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 MFAP4P55083 255 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 PIGPP57054 158 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 HSPE1P61604 102 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 BLOC1S1P78537 153 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 PRCDQ00LT1 54 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 DHODHQ02127 395 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 TNFRSF9Q07011 255 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 FGL1Q08830 312 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 TEX261Q6UWH6 196 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 UBAC2Q8NBM4 344 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 NPIPB3Q92617 1050 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 RNF183Q96D59 192 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 OR10C1Q96KK4 312 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 RNF2Q99496 336 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 TXN2Q99757 166 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 RHPN1-AS1Q9BWJ2 59 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 NAA60Q9H7X0 242 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 SHPKQ9UHJ6 478 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 U3KQ87 197 aa6.84□□□□□ -1.31
CTNNA1-221ENST00000520339 IGHV7-4-1A0A0J9YVY3 117 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 MT-CO2P00403 227 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 AKR1D1P51857 326 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 RND3P61587 244 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 SUPT4H1P63272 117 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 SMCO1Q147U7 214 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 DEFB135Q30KP9 77 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 H2BFWTQ7Z2G1 175 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 ZNF114Q8NC26 417 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 TMEM116Q8NCL8 245 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 OR4A16Q8NH70 328 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 MAP6D1Q9H9H5 199 aa6.83□□□□□ -1.32
CTNNA1-221ENST00000520339 IGHV3-49A0A0A0MS15 119 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 CXorf65A6NEN9 183 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 SMLR1H3BR10 107 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 SCO1O75880 301 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 YIF1AO95070 293 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 IGKV1-5P01602 117 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 IGHV3-48P01763 117 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 P0C879 139 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 RPL35P42766 123 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 CMC4P56277 68 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 H2BFSP57053 126 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 SRPXP78539 464 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 ERHP84090 104 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 BTN1A1Q13410 526 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 IZUMO4Q1ZYL8 232 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 PVRIGQ6DKI7 326 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 OR2T35Q8NGX2 323 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 LINC00476Q8WZB0 136 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 GALNT14Q96FL9 552 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 KCNIP3Q9Y2W7 256 aa6.82□□□□□ -1.32
CTNNA1-221ENST00000520339 TRAV14DV4A0A0A6YYC5 116 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 RPS10-NUDT3A0A1W2PQS6 291 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 NUPR2A6NF83 97 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 INS-IGF2F8WCM5 200 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 CCSO14618 274 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 SIX6O95475 246 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 OR5AC1P0C628 307 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 TOMM20LQ6UXN7 152 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 GSG1LQ6UXU4 331 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 APRG1Q8IVJ8 170 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 C2orf88Q9BSF0 95 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 CSTL1Q9H114 145 aa6.81□□□□□ -1.32
CTNNA1-221ENST00000520339 IGHV3OR16-13A0A075B7E8 117 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 IGHV3-74A0A0B4J1X5 117 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 PIGBOS1A0A0B4J2F0 54 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 C3orf85A0A1B0GTC6 90 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 C5orf51A6NDU8 294 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 H0YIZ8 118 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 GNG7O60262 68 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 TMEM50AO95807 157 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 IFNA21P01568 189 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 APOHP02749 345 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms