RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 SNRPCP09234 159 aaKnown RBP13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 FGF8P55075 233 aaPredicted RBP13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 CCL20P78556 96 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 ACOT6Q3I5F7 207 aaPredicted RBP13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 FAM78BQ5VT40 261 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 C4orf3Q8WVX3 66 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 RAX2Q96IS3 184 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 C20orf24Q9BUV8 137 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 C19orf24Q9BVV8 132 aa13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.32
TSNARE1-205ENST00000520166 IGHV3-66A0A0C4DH42 116 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 ZNF320A2RRD8 509 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 UMAD1C9J7I0 102 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 COX7A2P2O60397 106 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 GGCTO75223 188 aaKnown RBP13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 HYPMO75409 117 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 RAB5CP51148 216 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 FOXL1Q12952 345 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 LCN15Q6UWW0 184 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 RAB24Q969Q5 203 aa13.02□□□□□ -0.33
TSNARE1-205ENST00000520166 HSPB1P04792 205 aaKnown RBP13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 HOXD3P31249 432 aaPredicted RBP13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 PLP1P60201 277 aa13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 C10orf113Q5VZT2 155 aa13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 SAT2Q96F10 170 aaPredicted RBP13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 SCRT1Q9BWW7 348 aa13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 TMPRSS5Q9H3S3 457 aa13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 GAR1Q9NY12 217 aaKnown RBP13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 TSSC4Q9Y5U2 329 aaPredicted RBP13.01□□□□□ -0.33
TSNARE1-205ENST00000520166 LINC00862A6NCI5 91 aa13□□□□□ -0.33
TSNARE1-205ENST00000520166 SYNJ2BPP57105 145 aa13□□□□□ -0.33
TSNARE1-205ENST00000520166 BLOC1S1P78537 153 aa13□□□□□ -0.33
TSNARE1-205ENST00000520166 OR1N2Q8NGR9 330 aa13□□□□□ -0.33
TSNARE1-205ENST00000520166 ATP6V0BQ99437 205 aa13□□□□□ -0.33
TSNARE1-205ENST00000520166 WNK1Q9H4A3 2382 aa13□□□□□ -0.33
TSNARE1-205ENST00000520166 RELQ04864 619 aaPredicted RBP12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 PXDC1Q5TGL8 231 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 SFT2D1Q8WV19 159 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 ZNF503Q96F45 646 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 KCNIP2Q9NS61 270 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 TRRAPQ9Y4A5 3859 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 VWFP04275 2813 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 SEC14L6B5MCN3 397 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 FAM209BQ5JX69 171 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 SLC25A39Q9BZJ4 359 aaPredicted RBP12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 HRH4Q9H3N8 390 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 HIGD1AQ9Y241 93 aa12.99□□□□□ -0.33
TSNARE1-205ENST00000520166 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 NDUFA4O00483 81 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 MBP02144 154 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 FABP1P07148 127 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 SLC25A2Q9BXI2 301 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 ACTR3CQ9C0K3 210 aaPredicted RBP12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 FUT9Q9Y231 359 aa12.98□□□□□ -0.33
TSNARE1-205ENST00000520166 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 LINC01619G3V211 115 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 KLF5Q13887 457 aaPredicted RBP12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 COMMD7Q86VX2 200 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 GPHB5Q86YW7 130 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 OR1L4Q8NGR5 311 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 GATAD1Q8WUU5 269 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
TSNARE1-205ENST00000520166 CCL24O00175 119 aa12.96□□□□□ -0.33
TSNARE1-205ENST00000520166 PYYP10082 97 aa12.96□□□□□ -0.33
TSNARE1-205ENST00000520166 RHOBP62745 196 aa12.96□□□□□ -0.33
TSNARE1-205ENST00000520166 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
TSNARE1-205ENST00000520166 MBD3L1Q8WWY6 194 aa12.96□□□□□ -0.33
TSNARE1-205ENST00000520166 ELOA3CA0A087WX78 387 aaPredicted RBP12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 CTXND1A0A1B0GTU2 59 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 MAP1LC3B2A6NCE7 125 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 H3BRN7 92 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 H3BTX0 84 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 SCGB2A1O75556 95 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 DPPA3Q6W0C5 159 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 DPF1Q92782 380 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 PFDN5Q99471 154 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 CITED1Q99966 193 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 SHANK2-AS3Q9BTD1 123 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 MAP1LC3BQ9GZQ8 125 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 MED9Q9NWA0 146 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 RABAC1Q9UI14 185 aa12.96□□□□□ -0.34
TSNARE1-205ENST00000520166 ZNF98A6NK75 572 aa12.95□□□□□ -0.34
TSNARE1-205ENST00000520166 OR10J4P0C629 311 aa12.95□□□□□ -0.34
TSNARE1-205ENST00000520166 STAG3L2P0CL84 134 aa12.95□□□□□ -0.34
TSNARE1-205ENST00000520166 STAG3L3P0CL85 134 aa12.95□□□□□ -0.34
TSNARE1-205ENST00000520166 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
TSNARE1-205ENST00000520166 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms