RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 NUDT19A8MXV4 375 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 HMGB3O15347 200 aaKnown RBP16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 HYPMO75409 117 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 SMUG1Q53HV7 270 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 FAM78BQ5VT40 261 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 C10orf113Q5VZT2 155 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 ZFAND3Q9H8U3 227 aa16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 TSSC4Q9Y5U2 329 aaPredicted RBP16.5■□□□□ 0.23
PTP4A3-203ENST00000520105 UNQ9165/PRO28630Q6UXU0 137 aa16.49■□□□□ 0.23
PTP4A3-203ENST00000520105 C8orf86Q6ZUL3 223 aa16.49■□□□□ 0.23
PTP4A3-203ENST00000520105 GATAD1Q8WUU5 269 aa16.49■□□□□ 0.23
PTP4A3-203ENST00000520105 DUX3Q96PT4 197 aa16.49■□□□□ 0.23
PTP4A3-203ENST00000520105 A0A1W2PPV4 95 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 RAB19A4D1S5 217 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 HSPB1P04792 205 aaKnown RBP16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 AWAT1Q58HT5 328 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 MORN5Q5VZ52 161 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 OR1L4Q8NGR5 311 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 RAB24Q969Q5 203 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 C20orf24Q9BUV8 137 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 MRPL27Q9P0M9 148 aaKnown RBP16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 ELOA3CA0A087WX78 387 aaPredicted RBP16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 DPPA3Q6W0C5 159 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 MIR17HGQ75NE6 70 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 LINC00305Q7Z4B0 112 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 OR11H1Q8NG94 326 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 WFDC12Q8WWY7 111 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 PFDN5Q99471 154 aa16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 ACTR3CQ9C0K3 210 aaPredicted RBP16.48■□□□□ 0.23
PTP4A3-203ENST00000520105 SEC14L6B5MCN3 397 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 TEX46H3BTG2 121 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 NDUFA4O00483 81 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 CDC34P49427 236 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 BTN1A1Q13410 526 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 RPEL1Q2QD12 228 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 PXDC1Q5TGL8 231 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 LCN15Q6UWW0 184 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 SAT2Q96F10 170 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 HIGD1AQ9Y241 93 aa16.47■□□□□ 0.23
PTP4A3-203ENST00000520105 A0A1B0GV50 99 aa16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 ZNF320A2RRD8 509 aa16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 ZNF207O43670 478 aaKnown RBP16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 H2AFB1P0C5Y9 115 aa16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 RHOBP62745 196 aa16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 SFT2D1Q8WV19 159 aa16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 C19orf24Q9BVV8 132 aa16.46■□□□□ 0.23
PTP4A3-203ENST00000520105 TRAV5A0A0B4J249 113 aa16.46■□□□□ 0.22
PTP4A3-203ENST00000520105 BLOC1S1P78537 153 aa16.46■□□□□ 0.22
PTP4A3-203ENST00000520105 OR1N2Q8NGR9 330 aa16.46■□□□□ 0.22
PTP4A3-203ENST00000520105 FUT9Q9Y231 359 aa16.46■□□□□ 0.22
PTP4A3-203ENST00000520105 WNK1Q9H4A3 2382 aa16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 CTXND1A0A1B0GTU2 59 aa16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 ADARB2-AS1A8MUL3 147 aa16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 HOXD3P31249 432 aaPredicted RBP16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 FGF8P55075 233 aaPredicted RBP16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 LEMD1Q68G75 181 aa16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 GPHB5Q86YW7 130 aa16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 SLC25A39Q9BZJ4 359 aaPredicted RBP16.45■□□□□ 0.22
PTP4A3-203ENST00000520105 NSUN5P1Q3KNT7 163 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 FAM106AQ4KMX7 169 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 DPF1Q92782 380 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 MARC2Q969Z3 335 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 RAX2Q96IS3 184 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 HRH4Q9H3N8 390 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 RABAC1Q9UI14 185 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 LINC01619G3V211 115 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 SLURP1P55000 103 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 MBD3L1Q8WWY6 194 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 SCRT1Q9BWW7 348 aa16.44■□□□□ 0.22
PTP4A3-203ENST00000520105 MAP1LC3B2A6NCE7 125 aa16.43■□□□□ 0.22
PTP4A3-203ENST00000520105 TSPAN4O14817 238 aa16.43■□□□□ 0.22
PTP4A3-203ENST00000520105 SYNJ2BPP57105 145 aa16.43■□□□□ 0.22
PTP4A3-203ENST00000520105 TMEM190Q8WZ59 177 aa16.43■□□□□ 0.22
PTP4A3-203ENST00000520105 MAP1LC3BQ9GZQ8 125 aa16.43■□□□□ 0.22
PTP4A3-203ENST00000520105 IGHV3-49A0A0A0MS15 119 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 APOC3P02656 99 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 RNF2Q99496 336 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 MRPL32Q9BYC8 188 aaKnown RBP16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 IGHV3OR16-13A0A075B7E8 117 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 IGHV3-74A0A0B4J1X5 117 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 APOHP02749 345 aaPredicted RBP16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 ATF4P18848 351 aaPredicted RBP16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 CCL20P78556 96 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 TM4SF20Q53R12 229 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 SHANK2-AS3Q9BTD1 123 aa16.42■□□□□ 0.22
PTP4A3-203ENST00000520105 H3BRN7 92 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 CCL24O00175 119 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 STAG3L2P0CL84 134 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 STAG3L3P0CL85 134 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 C8orf88P0DMB2 117 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 NPPCP23582 126 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 KLF5Q13887 457 aaPredicted RBP16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 FAM167A-AS1Q96KT0 104 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 METTL26Q96S19 204 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 SLC25A2Q9BXI2 301 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 TMPRSS5Q9H3S3 457 aa16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 TECRQ9NZ01 308 aaKnown RBP16.41■□□□□ 0.22
PTP4A3-203ENST00000520105 IGHV3-66A0A0C4DH42 116 aa16.4■□□□□ 0.22
PTP4A3-203ENST00000520105 ZNF98A6NK75 572 aa16.4■□□□□ 0.22
PTP4A3-203ENST00000520105 ARL14EPLP0DKL9 152 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms