RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 INSL3P51460 131 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 EIF5AP63241 154 aaKnown RBP1.54□□□□□ -2.16
PTPN12-213ENST00000519553 SUPT4H1P63272 117 aaKnown RBP1.54□□□□□ -2.16
PTPN12-213ENST00000519553 RTL8BQ17RB0 113 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 BCL2L15Q5TBC7 163 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 C1orf140Q5VVS0 124 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 C22orf39Q6P5X5 142 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 SIGLECL1Q8N7X8 197 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 OR4D11Q8NGI4 311 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 OR8D4Q8NGM9 314 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 STAG3L4Q8TBR4 150 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 YPEL2Q96QA6 119 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 TMEM126AQ9H061 195 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 GSKIPQ9P0R6 139 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 NAT8Q9UHE5 227 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 EPDR1Q9UM22 224 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 MED31Q9Y3C7 131 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 NCAPD3P42695 1498 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 WDR90Q96KV7 1748 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 ECM29Q5VYK3 1845 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 MYH7BA7E2Y1 1941 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 DOCK4Q8N1I0 1966 aa1.54□□□□□ -2.16
PTPN12-213ENST00000519553 TRAV5A0A0B4J249 113 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 TRBV10-2A0A0K0K1G8 114 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 C1orf196B1AJZ1 125 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 H7C2G1 150 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 J3KT08 172 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 DEGS1O15121 323 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 CLPSP04118 112 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 FKBP2P26885 142 aaKnown RBP1.53□□□□□ -2.16
PTPN12-213ENST00000519553 SRP9P49458 86 aaKnown RBP1.53□□□□□ -2.16
PTPN12-213ENST00000519553 UBE2BP63146 152 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 NUMA1Q14980 2115 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 PHF5AQ7RTV0 110 aaKnown RBP1.53□□□□□ -2.16
PTPN12-213ENST00000519553 BPIFA4PQ86YQ2 179 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 OR5A1Q8NGJ0 315 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 DNAJC9Q8WXX5 260 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 HIST1H2BLQ99880 126 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 RETNLBQ9BQ08 111 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 CYSTM1Q9H1C7 97 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 TIMM9Q9Y5J7 89 aa1.53□□□□□ -2.16
PTPN12-213ENST00000519553 HEATR5AQ86XA9 2040 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 GREB1Q4ZG55 1949 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 OBSL1O75147 1896 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 PEG3Q9GZU2 1588 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 RIC1Q4ADV7 1423 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 TRAV36DV7A0A075B6V5 113 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 TRGV10A0A0A0MS01 117 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 IGHV1-18A0A0C4DH31 117 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 A0A0D9SG52 128 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 C7orf71A4D174 169 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM256-PLSCR3K7ERE1 68 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 CST8O60676 142 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 ZNF737O75373 536 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 EIF3IQ13347 325 aaKnown RBP1.52□□□□□ -2.17
PTPN12-213ENST00000519553 OR8B8Q15620 311 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 CCDC153Q494R4 210 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 DEFB128Q7Z7B8 93 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 C3orf56Q8N813 242 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM106AQ96A25 262 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 TCEAL4Q96EI5 215 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 SLC25A21Q9BQT8 299 aaPredicted RBP1.52□□□□□ -2.17
PTPN12-213ENST00000519553 YIPF3Q9GZM5 350 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 OTORQ9NRC9 128 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 EML6Q6ZMW3 1958 aa1.52□□□□□ -2.17
PTPN12-213ENST00000519553 XIRP1Q702N8 1843 aaKnown RBP1.52□□□□□ -2.17
PTPN12-213ENST00000519553 ARHGEF28Q8N1W1 1705 aaKnown RBP1.52□□□□□ -2.17
PTPN12-213ENST00000519553 SCAF11Q99590 1463 aaKnown RBP1.51□□□□□ -2.17
PTPN12-213ENST00000519553 TRAPPC8Q9Y2L5 1435 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 NCOA3Q9Y6Q9 1424 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 EFCAB10A6NFE3 127 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 OR51F1A6NGY5 319 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 OR2T1O43869 369 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 DBIP07108 87 aaKnown RBP1.51□□□□□ -2.17
PTPN12-213ENST00000519553 HTR1AP08908 422 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 SCTP09683 121 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 S100A11P31949 105 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 DYNLT3P51808 116 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 PSPHP78330 225 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 MORN2Q502X0 79 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 FAM27BQ5VT28 67 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM229BQ8NBD8 167 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 BORCS8Q96FH0 119 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 OR2H1Q9GZK4 316 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 POPDC3Q9HBV1 291 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM138Q9NPI0 162 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 TRPM1Q7Z4N2 1603 aa1.51□□□□□ -2.17
PTPN12-213ENST00000519553 MED23Q9ULK4 1368 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 COL6A6A6NMZ7 2263 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 TRBV7-6A0A0J9YX20 115 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM189A5PLL7 270 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 METTL15P1P0C7V9 234 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 AKR1C3P42330 323 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 EIF2B2P49770 351 aaKnown RBP1.5□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM258P61165 79 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 NDUFA5Q16718 116 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 SMIM21Q3B7S5 101 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 TMEM155Q4W5P6 130 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 BRMS1LQ5PSV4 323 aa1.5□□□□□ -2.17
PTPN12-213ENST00000519553 HRCT1Q6UXD1 115 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms