RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 UFSP1Q6NVU6 142 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 RBPMS2Q6ZRY4 209 aaKnown RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 SHISA6Q6ZSJ9 500 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 SLC25A48Q6ZT89 311 aaKnown RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 C17orf82Q86X59 251 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 FAM19A2Q8N3H0 131 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 RPRMLQ8N4K4 120 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 GCSAMQ8N6F7 178 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 C8orf46Q8TAG6 207 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 ZNF502Q8TBZ5 544 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 LITAFQ99732 161 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 GGTLC1Q9BX51 225 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 SLC25A2Q9BXI2 301 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 WDR54Q9H977 334 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 FGF21Q9NSA1 209 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 IDI2-AS1Q9NZ38 188 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 JPT1Q9UK76 154 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 RARRES3Q9UL19 164 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 AMMECR1Q9Y4X0 333 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 HLA-DRB4X5D2U9 266 aa2.79□□□□□ -1.96
CSMD3-209ENST00000519485 CHD3Q12873 2000 aaKnown RBP2.79□□□□□ -1.96
CSMD3-209ENST00000519485 TRBV20OR9-2A0A075B6H5 130 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 TRAV24A0A0B4J272 114 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 A0A1W2PR80 420 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 C5orf49A4QMS7 147 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 PGPEP1LA6NFU8 196 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 WISP2O76076 250 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 CA3P07451 260 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 CD27P26842 260 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 DUTP33316 252 aaKnown RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 CEBPDP49716 269 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 DUSP3P51452 185 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 HSPE1P61604 102 aaKnown RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 PPP1CAP62136 330 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 SRYQ05066 204 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 ZNF816Q0VGE8 651 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 PLGLAQ15195 96 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 LTC4SQ16873 150 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 TBC1D28Q2M2D7 210 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 KIAA1644Q3SXP7 199 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 MIC13Q5XKP0 118 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 EBLN2Q6P2I7 272 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 WDR82Q6UXN9 313 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 FOXI2Q6ZQN5 318 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 PDPNQ86YL7 162 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 DOLPP1Q86YN1 238 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 ATOH7Q8N100 152 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 ZADH2Q8N4Q0 377 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 TPRX1Q8N7U7 411 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 NUP35Q8NFH5 326 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 OR1L8Q8NGR8 309 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 OR10D3Q8NH80 312 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 OR1L3Q8NH93 324 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 ATP6V0E2Q8NHE4 81 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 FAM222BQ8WU58 562 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 PATE1Q8WXA2 126 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 C17orf77Q96MU5 243 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 ZNF714Q96N38 554 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 GPR82Q96P67 336 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 RCHY1Q96PM5 261 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 CDX2Q99626 313 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 MGST2Q99735 147 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 VGLL1Q99990 258 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 NABP2Q9BQ15 211 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 RNASE7Q9H1E1 156 aaKnown RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 RPP21Q9H633 154 aaKnown RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 ZNF581Q9P0T4 197 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 B4GALT7Q9UBV7 327 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 MMP17Q9ULZ9 603 aa2.78□□□□□ -1.96
CSMD3-209ENST00000519485 FOXA2Q9Y261 457 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 GOLGA4Q13439 2230 aaKnown RBP2.78□□□□□ -1.96
CSMD3-209ENST00000519485 TDRD6O60522 2096 aaKnown RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 DOCK9Q9BZ29 2069 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 IGHV1OR21-1A0A087WYE8 117 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 LOC102723996A0A087X1L8 192 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 LOC102724200A0A096LPH7 203 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 TRAV8-6A0A0B4J262 113 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 TRBV6-1A0A0K0K1D8 114 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1B0GUS0 222 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SERTM2A0A1B0GWG4 89 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1B0GXF2 115 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 LINC01549A6NIU2 74 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 HIGD1CA8MV81 97 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PPIAL4DF5H284 164 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 INS-IGF2F8WCM5 200 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 H3BUT2 72 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PEX7O00628 323 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SYNGR1O43759 233 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 GNG7O60262 68 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 COX7A2P2O60397 106 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SPINK4O60575 86 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 ATP5LO75964 103 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 GOSR1O95249 250 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 OR2H2O95918 312 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 B4GALT1P15291 398 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SSTR5P35346 364 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 VDAC2P45880 294 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 CYB561P49447 251 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms