RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 CTXN2P0C2S0 81 aa0.71□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ATP5G3P48201 142 aa0.71□□□□□ -2.3
RNU6-1028P-201ENST00000517164 LIN52Q52LA3 116 aa0.71□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TMEM70Q9BUB7 260 aa0.71□□□□□ -2.3
RNU6-1028P-201ENST00000517164 COL1A1P02452 1464 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ALPK3Q96L96 1907 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TRBV19A0A075B6N1 114 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 FAM159BA6NKW6 160 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 NDUFB3O43676 98 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 EFNA4P52798 201 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 C22orf39Q6P5X5 142 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 LINC00322Q6ZN03 302 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ENY2Q9NPA8 101 aa0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 FAM32AQ9Y421 112 aaKnown RBP0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 CHD3Q12873 2000 aaKnown RBP0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ROMO1P60602 79 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 GKN2Q86XP6 184 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 MNS1Q8NEH6 495 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 OR10K1Q8NGX5 313 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 YPEL2Q96QA6 119 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 SLC25A21Q9BQT8 299 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 LINC00467Q9BRT7 94 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TMEM14CQ9P0S9 112 aa0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 MYO18AQ92614 2054 aaKnown RBP0.69□□□□□ -2.3
RNU6-1028P-201ENST00000517164 UNC13CQ8NB66 2214 aa0.68□□□□□ -2.3
RNU6-1028P-201ENST00000517164 IGHV1-58A0A0C4DH39 117 aa0.68□□□□□ -2.3
RNU6-1028P-201ENST00000517164 A8MWV9 139 aa0.68□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TAX1BP3O14907 124 aa0.68□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TP53RKQ96S44 253 aa0.68□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ORMDL1Q9P0S3 153 aa0.68□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ASCC3Q8N3C0 2202 aaKnown RBP0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TLCD2A6NGC4 264 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 B4DSR2 109 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 NUPR1O60356 82 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 CD2P06729 351 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 CST2P09228 141 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 CYBAP13498 195 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 BCL2L15Q5TBC7 163 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 GOLT1AQ6ZVE7 132 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 OR10X1Q8NGY0 326 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 DGCR14Q96DF8 476 aaKnown RBP0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 LINC00052Q96N35 136 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 IMUPQ9GZP8 106 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 PCTPQ9UKL6 214 aa0.67□□□□□ -2.3
RNU6-1028P-201ENST00000517164 PCF11O94913 1555 aaKnown RBP0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TNS3Q68CZ2 1445 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 TRAV10A0A0B4J240 114 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 M0R378 163 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 HMGB3O15347 200 aaKnown RBP0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 CST8O60676 142 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 FADDQ13158 208 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 C2orf82Q6UX34 121 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 C4orf22Q6V702 233 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 C9orf16Q9BUW7 83 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 OPTCQ9UBM4 332 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ARL2BPQ9Y2Y0 163 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 LY96Q9Y6Y9 160 aa0.66□□□□□ -2.3
RNU6-1028P-201ENST00000517164 ARHGEF11O15085 1522 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 A0A1W2PPM0 123 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 IFNA7P01567 189 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 IFNA6P05013 189 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 REEP5Q00765 189 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 AKIRIN2Q53H80 203 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 ZNF833PQ6ZTB9 187 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 OR5D14Q8NGL3 314 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 DOCK4Q8N1I0 1966 aa0.65□□□□□ -2.31
RNU6-1028P-201ENST00000517164 CITO14578 2027 aa0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 SERPINA1P01009 418 aa0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 UBE2BP63146 152 aa0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 TAF1AQ15573 450 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 S100A7AQ86SG5 101 aa0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 PLPP5Q8NEB5 264 aa0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 PSTPIP2Q9H939 334 aa0.64□□□□□ -2.31
RNU6-1028P-201ENST00000517164 MYO5AQ9Y4I1 1855 aaKnown RBP0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 OR2T8A6NH00 312 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 E7EUB6 86 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 TMEM256-PLSCR3K7ERE1 68 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 S100A6P06703 90 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 HOXA6P31267 233 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 DSCR4P56555 118 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 HSPE1P61604 102 aaKnown RBP0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 MYL5Q02045 173 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 Q8TAT8 98 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 NPCDR1Q9BY65 106 aa0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 KDM6AO15550 1401 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1028P-201ENST00000517164 SIP14410 1827 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 E2F6O75461 281 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 C1QBP02746 253 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 C1orf134Q5TEV5 83 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 EIF5AL1Q6IS14 154 aaKnown RBP0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 KRTAP26-1Q6PEX3 210 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 GRINAQ7Z429 371 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 CANT1Q8WVQ1 401 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 ARMC1Q9NVT9 282 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 TNFSF18Q9UNG2 199 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 PTPRFP10586 1907 aa0.62□□□□□ -2.31
RNU6-1028P-201ENST00000517164 PHRF1Q9P1Y6 1649 aaKnown RBP0.61□□□□□ -2.31
RNU6-1028P-201ENST00000517164 F8W1H4 67 aa0.61□□□□□ -2.31
RNU6-1028P-201ENST00000517164 GGCTO75223 188 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms